RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	TBX18	O95935	607 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FUCA1	P04066	466 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	HSPA13	P48723	471 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RAB14	P61106	215 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	COPZ1	P61923	177 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CDK16	Q00536	496 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC18A2	Q05940	514 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	UBE2U	Q5VVX9	321 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	OGFOD2	Q6N063	350 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FRA10AC1	Q70Z53	315 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	STRA8	Q7Z7C7	330 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	AFAP1L2	Q8N4X5	818 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ATPAF2	Q8N5M1	289 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NPW	Q8N729	165 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ZNF527	Q8NB42	609 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	OR10T2	Q8NGX3	314 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TSGA13	Q96PP4	275 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MIPEP	Q99797	713 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	THTPA	Q9BU02	230 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CASS4	Q9NQ75	786 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ASAH2	Q9NR71	780 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LINC01565	O15544	149 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PMPCB	O75439	489 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RFPL1	O75677	317 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	EMP3	P54852	163 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CARTPT	Q16568	116 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	INTS6L	Q5JSJ4	861 aa	Known RBP	11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CMTR2	Q8IYT2	770 aa	Known RBP	11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PYDC1	Q8WXC3	89 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MFSD3	Q96ES6	412 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC2A13	Q96QE2	648 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SPON2	Q9BUD6	331 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LRRC40	Q9H9A6	602 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PNPLA8	Q9NP80	782 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.25	□□□□□ -0.61	4e-7	■■■■■ 29.4
SUPT5H-216	ENST00000599335	XYLB	O75191	536 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ENO1	P06733	434 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	HDC	P19113	662 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	AQP5	P55064	265 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FASTKD1	Q53R41	847 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NAT16	Q8N8M0	369 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SPPL3	Q8TCT6	385 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC26A7	Q8TE54	656 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ASZ1	Q8WWH4	475 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CERS2	Q96G23	380 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CDX2	Q99626	313 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TRPM5	Q9NZQ8	1165 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	USP3	Q9Y6I4	520 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FAM159B	A6NKW6	160 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ZNF487	B1APH4	448 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GIPC1	O14908	333 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NOS1AP	O75052	506 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CXCL10	P02778	98 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PSMA4	P25789	261 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PCSK6	P29122	969 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TAF10	Q12962	218 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TRIP10	Q15642	601 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FBXO43	Q4G163	708 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TXNDC8	Q6A555	127 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TTC7B	Q86TV6	843 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ALYREF	Q86V81	257 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC39A11	Q8N1S5	342 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RYBP	Q8N488	228 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CMTM3	Q96MX0	182 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	IARS2	Q9NSE4	1012 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	KIF17	Q9P2E2	1029 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	BCAP29	Q9UHQ4	241 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MTO1	Q9Y2Z2	717 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CHD9	Q3L8U1	2897 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CACNA1G	O43497	2377 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GNB5	O14775	395 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	DCLK1	O15075	740 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PDPK1	O15530	556 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CCNK	O75909	580 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SNX4	O95219	450 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SOD2	P04179	222 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	APEH	P13798	732 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PGF	P49763	221 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	POU6F1	Q14863	301 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PRKD1	Q15139	912 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	KIAA1614	Q5VZ46	1190 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CD300LG	Q6UXG3	332 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TFAP2D	Q7Z6R9	452 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CLNK	Q7Z7G1	428 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PIK3C3	Q8NEB9	887 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SPATA22	Q8NHS9	363 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PLEKHA8	Q96JA3	519 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CCDC106	Q9BWC9	280 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CHRAC1	Q9NRG0	131 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SIRT5	Q9NXA8	310 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MPP6	Q9NZW5	540 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	STX18	Q9P2W9	335 aa	Known RBP	11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TLK1	Q9UKI8	766 aa		11.24	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC12A8	A0AV02	714 aa		11.23	□□□□□ -0.61
SUPT5H-216	ENST00000599335	BTN3A1	O00481	513 aa		11.23	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TGM5	O43548	720 aa		11.23	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NDUFS2	O75306	463 aa		11.23	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LYPLA1	O75608	230 aa	Predicted RBP	11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms