RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SEPT7Q16181 437 aaKnown RBP13.58□□□□□ -0.24
SCAF1-203ENST00000598359 ATP13A5Q4VNC0 1218 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 SNAP47Q5SQN1 464 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-203ENST00000598359 IYDQ6PHW0 289 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 FAM151BQ6UXP7 276 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 KIAA1328Q86T90 577 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 ZFAND4Q86XD8 727 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 PHYKPLQ8IUZ5 450 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 ZNF843Q8N446 348 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 LRRC57Q8N9N7 239 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 SLC38A3Q99624 504 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 CMKLR1Q99788 373 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 APOL2Q9BQE5 337 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 FICDQ9BVA6 458 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 RMI1Q9H9A7 625 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A7Q9HAW7 530 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A10Q9HAW8 530 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A8Q9HAW9 530 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 TRIM39Q9HCM9 518 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 IL26Q9NPH9 171 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 SCHIP1Q9P0W5 487 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-203ENST00000598359 NFKBIL1Q9UBC1 381 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-203ENST00000598359 PACSIN2Q9UNF0 486 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-203ENST00000598359 DNAJC16Q9Y2G8 782 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 PCDHGA7Q9Y5G6 932 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 SCN8AQ9UQD0 1980 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 BTNL10A8MVZ5 291 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 CTNNA2P26232 953 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 FASLGP48023 281 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 LIMK2P53671 638 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 RWDD2BP57060 319 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 EIF3EP60228 445 aaKnown RBP13.57□□□□□ -0.24
SCAF1-203ENST00000598359 COPS2P61201 443 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 CHRNA6Q15825 494 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 INSCQ1MX18 579 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 PCSK4Q6UW60 755 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 GLT6D1Q7Z4J2 308 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 ZNF547Q8IVP9 402 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 GDAP1Q8TB36 358 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 ZNF592Q92610 1267 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 CCDC97Q96F63 343 aaPredicted RBP13.57□□□□□ -0.24
SCAF1-203ENST00000598359 AHCYL2Q96HN2 611 aaKnown RBP13.57□□□□□ -0.24
SCAF1-203ENST00000598359 VAT1Q99536 393 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 TBC1D10AQ9BXI6 508 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 GBA3Q9H227 469 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 RAD18Q9NS91 495 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 TRHDEQ9UKU6 1024 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
SCAF1-203ENST00000598359 ZFC3H1O60293 1989 aaKnown RBP13.57□□□□□ -0.24
SCAF1-203ENST00000598359 SPTA1P02549 2419 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 CCDC66A2RUB6 948 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 A8MU76 341 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 J3QKU1 62 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 CHUKO15111 745 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 NVLO15381 856 aaKnown RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 KCNN4O15554 427 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 ZW10O43264 779 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 EFSO43281 561 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 CDK14O94921 469 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 FTCDO95954 541 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 RBP3P10745 1247 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 FGF3P11487 239 aaPredicted RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 F3P13726 295 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 PSMB4P28070 264 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 HMGCLP35914 325 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 TNNT3P45378 269 aaPredicted RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 UCNP55089 124 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 VAC14Q08AM6 782 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 MPP3Q13368 585 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 XRCC4Q13426 336 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 KIAA1614Q5VZ46 1190 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 PDPK2PQ6A1A2 396 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 DARS2Q6PI48 645 aaKnown RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 VASH2Q86V25 355 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 LSM14AQ8ND56 463 aaKnown RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 OR4D9Q8NGE8 314 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 CCDC110Q8TBZ0 833 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 NAT14Q8WUY8 206 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 JPH3Q8WXH2 748 aaPredicted RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 NCSTNQ92542 709 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 PLEKHG4BQ96PX9 1271 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 FSD1LQ9BXM9 530 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 SARS2Q9NP81 518 aaKnown RBP13.56□□□□□ -0.24
SCAF1-203ENST00000598359 IL17CQ9P0M4 197 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 CPNE7Q9UBL6 633 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 KLHL3Q9UH77 587 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 KCTD3Q9Y597 815 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 ARL5AQ9Y689 179 aa13.56□□□□□ -0.24
SCAF1-203ENST00000598359 TEX51A0A1B0GUA7 166 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 PDZK1P1A8MUH7 402 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 GAPDHSO14556 408 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-203ENST00000598359 KMOO15229 486 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 EPOP01588 193 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 THRAP10827 490 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 HLA-DPA1P20036 260 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 RPL10P27635 214 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms