RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ZNF648Q5T619 568 aaPredicted RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 MACC1Q6ZN28 852 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 TRIM74Q86UV6 250 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 PIM3Q86V86 326 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 FAM160A2Q8N612 972 aaPredicted RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 CLDN19Q8N6F1 224 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 NAT14Q8WUY8 206 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 SPACA7Q96KW9 195 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 MYOCQ99972 504 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 WDR26Q9H7D7 661 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 MKS1Q9NXB0 559 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 TLK1Q9UKI8 766 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 SMG5Q9UPR3 1016 aaKnown RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 MED16Q9Y2X0 877 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 EML5Q05BV3 1969 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 COPEO14579 308 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 PRPF4O43172 522 aaKnown RBP eCLIP14.48□□□□□ -0.09
VRK3-212ENST00000596814 FSBPO95073 299 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 OR56A5P0C7T3 313 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 SLC35E2BP0CK96 405 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 CHRM3P20309 590 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 HNRNPA2B1P22626 353 aaKnown RBP14.48□□□□□ -0.09
VRK3-212ENST00000596814 TIAL1Q01085 375 aaKnown RBP eCLIP14.48□□□□□ -0.09
VRK3-212ENST00000596814 PDAP1Q13442 181 aaKnown RBP14.48□□□□□ -0.09
VRK3-212ENST00000596814 INPP5AQ14642 412 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 PPM1JQ5JR12 505 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 DET1Q7L5Y6 550 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 FRMD1Q8N878 549 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 BANPQ8N9N5 519 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 FAM76AQ8TAV0 307 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 FAM136AQ96C01 138 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 COX14Q96I36 57 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 GPR21Q99679 349 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 SLC13A1Q9BZW2 595 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 POPDC3Q9HBV1 291 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 GPAMQ9HCL2 828 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 KCNK9Q9NPC2 374 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.48□□□□□ -0.09
VRK3-212ENST00000596814 ANKRD6Q9Y2G4 727 aa14.48□□□□□ -0.09
VRK3-212ENST00000596814 OAS3Q9Y6K5 1087 aaKnown RBP14.48□□□□□ -0.09
VRK3-212ENST00000596814 A0A087X1B8 175 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 TMEM120BA0PK00 339 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 IQCF5A8MTL0 148 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 F8W8V4 182 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 QSOX1O00391 747 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 TYROBPO43914 113 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 NDUFS2O75306 463 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 AP2A2O94973 939 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 IGHV4-34P06331 123 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 CD9P21926 228 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 AKT2P31751 481 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 TRIM23P36406 574 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 TMEM115Q12893 351 aaPredicted RBP14.47□□□□□ -0.09
VRK3-212ENST00000596814 UGT3A1Q6NUS8 523 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 KDM7AQ6ZMT4 941 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 CCDC91Q7Z6B0 441 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 ARFGAP2Q8N6H7 521 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 PANX3Q96QZ0 392 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 TEX101Q9BY14 249 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 IQCGQ9H095 443 aaKnown RBP14.47□□□□□ -0.09
VRK3-212ENST00000596814 TRIM39Q9HCM9 518 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 PRMT8Q9NR22 394 aaPredicted RBP14.47□□□□□ -0.09
VRK3-212ENST00000596814 PHPT1Q9NRX4 125 aaPredicted RBP14.47□□□□□ -0.09
VRK3-212ENST00000596814 OGFRQ9NZT2 677 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 TRMT6Q9UJA5 497 aaKnown RBP14.47□□□□□ -0.09
VRK3-212ENST00000596814 ACOT9Q9Y305 439 aa14.47□□□□□ -0.09
VRK3-212ENST00000596814 VEGFDO43915 354 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 GLRA3O75311 464 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 TRIM16O95361 564 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 ITGB6P18564 788 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 HOXA6P31267 233 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 NUDT1P36639 197 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 GMPRP36959 345 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 CCT5P48643 541 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 IRF9Q00978 393 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 GTF2H3Q13889 308 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 USP39Q53GS9 565 aaKnown RBP14.46□□□□□ -0.09
VRK3-212ENST00000596814 ADGRG6Q86SQ4 1221 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 TBC1D1Q86TI0 1168 aaPredicted RBP14.46□□□□□ -0.09
VRK3-212ENST00000596814 RASGEF1AQ8N9B8 481 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 LKAAEAR1Q8TD35 194 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 CD200R1Q8TD46 325 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 BIRC7Q96CA5 298 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 SGF29Q96ES7 293 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 TSNARE1Q96NA8 513 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 TSSK1BQ9BXA7 367 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 OR2AG1Q9H205 316 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 SARS2Q9NP81 518 aaKnown RBP14.46□□□□□ -0.09
VRK3-212ENST00000596814 OR1A2Q9Y585 309 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 CACNA1IQ9P0X4 2223 aa14.46□□□□□ -0.09
VRK3-212ENST00000596814 OR2AG2A6NM03 316 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 FPGTO14772 594 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 LAMTOR5O43504 91 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 CDK14O94921 469 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 WISP3O95389 354 aaPredicted RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 ASMTLO95671 621 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 TOP3BO95985 862 aaKnown RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 MYCLP1P12525 358 aaPredicted RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 ZNF37AP17032 561 aaPredicted RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 CRHR1P34998 444 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms