RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 DAB2P98082 770 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 DNAJC21Q5F1R6 531 aaKnown RBP14.17□□□□□ -0.14
LIG1-208ENST00000595758 C6orf132Q5T0Z8 1188 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 HIBCHQ6NVY1 386 aaPredicted RBP14.17□□□□□ -0.14
LIG1-208ENST00000595758 SLC30A9Q6PML9 568 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 CES3Q6UWW8 571 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 TRAPPC5Q8IUR0 188 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 PIANPQ8IYJ0 282 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 BBOF1Q8ND07 529 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 OR4L1Q8NH43 312 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 MFSD3Q96ES6 412 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 ZNF514Q96K75 400 aaPredicted RBP14.17□□□□□ -0.14
LIG1-208ENST00000595758 SIGLEC10Q96LC7 697 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 APOLD1Q96LR9 279 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 BOCQ9BWV1 1114 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 DPEP2Q9H4A9 486 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 ZDHHC3Q9NYG2 299 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 NCKIPSDQ9NZQ3 722 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 TAAR2Q9P1P5 351 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 GULP1Q9UBP9 304 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 ST14Q9Y5Y6 855 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 MAD1L1Q9Y6D9 718 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 SPTBN2O15020 2390 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 FAM237BA0A1B0GVD1 139 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 CTAGE15A4D2H0 777 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 CTAGE8P0CG41 777 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 CKMT1AP12532 417 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 MYF5P13349 255 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 ZNF7P17097 686 aaPredicted RBP14.16□□□□□ -0.14
LIG1-208ENST00000595758 ACRV1P26436 265 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 FOXN2P32314 431 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 RPIAP49247 311 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 DUSP3P51452 185 aaPredicted RBP14.16□□□□□ -0.14
LIG1-208ENST00000595758 CTSCP53634 463 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 CALCOCO2Q13137 446 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 DNAJC3Q13217 504 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 DBN1Q16643 649 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 FASTKD1Q53R41 847 aaKnown RBP14.16□□□□□ -0.14
LIG1-208ENST00000595758 FNBP1LQ5T0N5 605 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 LYPLAL1Q5VWZ2 237 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 TMEM220Q6QAJ8 160 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 DET1Q7L5Y6 550 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 CTAGE6Q86UF2 777 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 ZNF547Q8IVP9 402 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 CTAGE4Q8IX94 777 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 PDIK1LQ8N165 341 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 SGF29Q96ES7 293 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 SGSM3Q96HU1 749 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 TTC1Q99614 292 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 RAB17Q9H0T7 212 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 DPH5Q9H2P9 285 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 SPATS2LQ9NUQ6 558 aaKnown RBP14.16□□□□□ -0.14
LIG1-208ENST00000595758 EVA1BQ9NVM1 165 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 SIRPGQ9P1W8 387 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 WHRNQ9P202 907 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 KCNK6Q9Y257 313 aa14.16□□□□□ -0.14
LIG1-208ENST00000595758 UTP11Q9Y3A2 253 aaKnown RBP14.16□□□□□ -0.14
LIG1-208ENST00000595758 ZNF106Q9H2Y7 1883 aaKnown RBP14.16□□□□□ -0.14
LIG1-208ENST00000595758 IGLV3-16A0A075B6K0 115 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 OR2AG2A6NM03 316 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 CD3EAPO15446 510 aaKnown RBP14.15□□□□□ -0.14
LIG1-208ENST00000595758 POP7O75817 140 aaKnown RBP14.15□□□□□ -0.14
LIG1-208ENST00000595758 VAPBO95292 243 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 PAMP19021 973 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 B4GALNT1Q00973 533 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 NR0B2Q15466 257 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 INSCQ1MX18 579 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 PLA2G4EQ3MJ16 856 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 BBS9Q3SYG4 887 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 ANKRD20A4Q4UJ75 823 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 CCDC157Q569K6 752 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 AARS2Q5JTZ9 985 aaKnown RBP14.15□□□□□ -0.14
LIG1-208ENST00000595758 DUPD1Q68J44 220 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 C8orf74Q6P047 294 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 OGFOD3Q6PK18 319 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 CERS6Q6ZMG9 384 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 TMEM135Q86UB9 458 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 SLC35F3Q8IY50 421 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 AGGF1Q8N302 714 aaeCLIP14.15□□□□□ -0.14
LIG1-208ENST00000595758 MMGT1Q8N4V1 131 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 ARL10Q8N8L6 244 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 KYQ8NBH2 561 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 STAMBPL1Q96FJ0 436 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 TIMM29Q9BSF4 260 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 KLC4Q9NSK0 619 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 CATSPERZQ9NTU4 200 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 SLC23A2Q9UGH3 650 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 APOBEC2Q9Y235 224 aaKnown RBP14.15□□□□□ -0.14
LIG1-208ENST00000595758 DNMT3AQ9Y6K1 912 aaPredicted RBP14.15□□□□□ -0.14
LIG1-208ENST00000595758 RPS6KL1Q9Y6S9 549 aa14.15□□□□□ -0.14
LIG1-208ENST00000595758 COL5A1P20908 1838 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 LY6G6EA0A0G2JKS1 128 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 CPED1A4D0V7 1026 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 B4DGG1 531 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 TP73O15350 636 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 KCNJ13O60928 360 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 FTH1P19P0C7X4 201 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 ATP1B2P14415 290 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 VCLP18206 1134 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 ACP1P24666 158 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms