RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CTSEP14091 401 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 DCTP40126 519 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 BASP1P80723 227 aaKnown RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 NME3Q13232 169 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 SEMA5AQ13591 1074 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 FASTKD3Q14CZ7 662 aaKnown RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 LONRF1Q17RB8 773 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TAOK1Q7L7X3 1001 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 SPRED1Q7Z699 444 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 GKN2Q86XP6 184 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TICAM1Q8IUC6 712 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 PDIK1LQ8N165 341 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TEX19Q8NA77 164 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 UHMK1Q8TAS1 419 aaKnown RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 APOBEC4Q8WW27 367 aaKnown RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 PMEPA1Q969W9 287 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TAAR9Q96RI9 348 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 C2orf49Q9BVC5 232 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 BRD8Q9H0E9 1235 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 ANLNQ9NQW6 1124 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 DDIT4Q9NX09 232 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 ARHGEF38Q9NXL2 777 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 AKAP7Q9P0M2 348 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 SLC24A2Q9UI40 661 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 VPS51Q9UID3 782 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 GGT7Q9UJ14 662 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TP53TG5Q9Y2B4 290 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TBC1D30Q9Y2I9 924 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 WASF2Q9Y6W5 498 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 F8P00451 2351 aa12.77□□□□□ -0.36
SCAF1-202ENST00000595242 TLDC2A0PJX2 215 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 NEMP1O14524 444 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 CAPN5O15484 640 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 SPAG6O75602 509 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 CNTN5O94779 1100 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 PRKCGP05129 697 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 PNLIPP16233 465 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 GLB1P16278 677 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 GCAP28676 217 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 LSP1P33241 339 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 PHBP35232 272 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 IGFALSP35858 605 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 FDFT1P37268 417 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 MAGEA3P43357 314 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 HK3P52790 923 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 GPX6P59796 221 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 IFI35P80217 286 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 SEPT6Q14141 434 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 PDK1Q15118 436 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 CCDC38Q502W7 563 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 FNBP1LQ5T0N5 605 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 CERCAMQ5T4B2 595 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 C22orf39Q6P5X5 142 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 LINGO4Q6UY18 593 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 PARS2Q7L3T8 475 aaKnown RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 RD3Q7Z3Z2 195 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 HEATR4Q86WZ0 1026 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 HID1Q8IV36 788 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 ZBED8Q8IZ13 594 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 GPR156Q8NFN8 814 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 TFB1MQ8WVM0 346 aaKnown RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 LRRC39Q96DD0 335 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 SLC45A3Q96JT2 553 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 SPATA13Q96N96 652 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 RDH14Q9HBH5 336 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 EIF2B3Q9NR50 452 aaKnown RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 CUEDC1Q9NWM3 386 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-202ENST00000595242 VANGL2Q9ULK5 521 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 PCDHGA3Q9Y5H0 932 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 TEX264Q9Y6I9 313 aa12.77□□□□□ -0.37
SCAF1-202ENST00000595242 FAM72CH0Y354 149 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 DUX1O43812 170 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 CLDN11O75508 207 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 ZNF821O75541 412 aaPredicted RBP12.76□□□□□ -0.37
SCAF1-202ENST00000595242 GSTA2P09210 222 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 FGF3P11487 239 aaPredicted RBP12.76□□□□□ -0.37
SCAF1-202ENST00000595242 ERCC2P18074 760 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 SLCO1A2P46721 670 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 TPI1P60174 286 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 CDK16Q00536 496 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 CDC20Q12834 499 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 DEFB109BQ30KR1 87 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 MSS51Q4VC12 460 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 MANEALQ5VSG8 457 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 MAMDC2Q7Z304 686 aaPredicted RBP12.76□□□□□ -0.37
SCAF1-202ENST00000595242 EXOC3L1Q86VI1 746 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 SRRM1Q8IYB3 904 aaKnown RBP12.76□□□□□ -0.37
SCAF1-202ENST00000595242 GALNT11Q8NCW6 608 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 RCBTB1Q8NDN9 531 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms