RNA–Protein interactions for RNA: ENST00000594780.1

CLPP-202, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2

Gene CLPP, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-202ENST00000594780 FCRL3Q96P31 734 aaPredicted RBP12.9□□□□□ -0.34
CLPP-202ENST00000594780 C19orf43Q9BQ61 176 aa12.9□□□□□ -0.34
CLPP-202ENST00000594780 TRIM56Q9BRZ2 755 aaKnown RBP12.9□□□□□ -0.34
CLPP-202ENST00000594780 TREX1Q9NSU2 369 aa12.9□□□□□ -0.34
CLPP-202ENST00000594780 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
CLPP-202ENST00000594780 ZNF180Q9UJW8 692 aa12.9□□□□□ -0.34
CLPP-202ENST00000594780 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.34
CLPP-202ENST00000594780 COL12A1Q99715 3063 aa12.9□□□□□ -0.34
CLPP-202ENST00000594780 USP9XQ93008 2570 aaPredicted RBP12.89□□□□□ -0.35
CLPP-202ENST00000594780 EXOC1LA0A1B0GW35 172 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 CAPN8A6NHC0 703 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
CLPP-202ENST00000594780 TK2O00142 265 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 PCDHGA12O60330 932 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 FAM155BO75949 473 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 TPH1P17752 444 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 ETV3P41162 512 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 IL9RQ01113 521 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 FZD2Q14332 565 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 GALNT3Q14435 633 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 INPP5AQ14642 412 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 LONRF1Q17RB8 773 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 LRRC66Q68CR7 880 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 CASC4Q6P4E1 433 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 TRMT10BQ6PF06 316 aaKnown RBP12.89□□□□□ -0.35
CLPP-202ENST00000594780 ADGRD1Q6QNK2 874 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 RFLNAQ6ZTI6 216 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 Q6ZVL8 140 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
CLPP-202ENST00000594780 PTAR1Q7Z6K3 402 aaPredicted RBP12.89□□□□□ -0.35
CLPP-202ENST00000594780 TECPR1Q7Z6L1 1165 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 PELI3Q8N2H9 469 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLPP-202ENST00000594780 PLA2G15Q8NCC3 412 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 PPHLN1Q8NEY8 458 aaKnown RBP12.89□□□□□ -0.35
CLPP-202ENST00000594780 BRSK1Q8TDC3 778 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 DCAKDQ8WVC6 231 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 CERS2Q96G23 380 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 LYSMD1Q96S90 227 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 ADGRE3Q9BY15 652 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 CHRAC1Q9NRG0 131 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 SMYD2Q9NRG4 433 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 RPS6KL1Q9Y6S9 549 aa12.89□□□□□ -0.35
CLPP-202ENST00000594780 COL5A1P20908 1838 aaPredicted RBP12.89□□□□□ -0.35
CLPP-202ENST00000594780 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 PSMD11O00231 422 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 LDB2O43679 373 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 CLDN7O95471 211 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 C1SP09871 688 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 ARCN1P48444 511 aaKnown RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 CCT8P50990 548 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 YPEL5P62699 121 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 MGAT5Q09328 741 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 BNIP3Q12983 259 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 PDE1CQ14123 709 aaPredicted RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 ARHGEF7Q14155 803 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 POU6F1Q14863 301 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 KIAA0930Q6ICG6 404 aaPredicted RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 CAPN12Q6ZSI9 719 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 KANSL1Q7Z3B3 1105 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 LRRC6Q86X45 466 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 SAP25Q8TEE9 199 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 ZNF669Q96BR6 464 aaPredicted RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 EID2BQ96D98 161 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 MFSD3Q96ES6 412 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 DTD2Q96FN9 168 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 PAFAH2Q99487 392 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 APOOQ9BUR5 198 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 HACD3Q9P035 362 aa12.88□□□□□ -0.35
CLPP-202ENST00000594780 PSMC3IPQ9P2W1 217 aaPredicted RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 PNMA8BQ9ULN7 279 aaPredicted RBP12.88□□□□□ -0.35
CLPP-202ENST00000594780 TEX15Q9BXT5 2789 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 KNTC1P50748 2209 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 CXorf49A8MYA2 514 aaPredicted RBP12.87□□□□□ -0.35
CLPP-202ENST00000594780 K7ESM1 405 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 TOR1BO14657 336 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
CLPP-202ENST00000594780 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 PCCBP05166 539 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 ZNF30P17039 623 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 ARNTP27540 789 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 NMBRP28336 390 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 EPHA8P29322 1005 aaPredicted RBP12.87□□□□□ -0.35
CLPP-202ENST00000594780 OAS2P29728 719 aaKnown RBP12.87□□□□□ -0.35
CLPP-202ENST00000594780 TRIM23P36406 574 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
CLPP-202ENST00000594780 STC1P52823 247 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 CYP4F3Q08477 520 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
CLPP-202ENST00000594780 SUZ12Q15022 739 aaKnown RBP12.87□□□□□ -0.35
CLPP-202ENST00000594780 EFTUD2Q15029 972 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLPP-202ENST00000594780 ZNF542PQ5EBM4 170 aa12.87□□□□□ -0.35
CLPP-202ENST00000594780 TSTD2Q5T7W7 516 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms