RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GPRC6AQ5T6X5 926 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 NKAIN2Q5VXU1 208 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 PIM3Q86V86 326 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF761Q86XN6 746 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 TAB3Q8N5C8 712 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 RASGEF1AQ8N9B8 481 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 TRIM58Q8NG06 486 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 OR13C4Q8NGS5 318 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 GDAP1Q8TB36 358 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 DCBLD2Q96PD2 775 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 NUDT22Q9BRQ3 303 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 TIMM29Q9BSF4 260 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 EPB41L5Q9HCM4 733 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 SARS2Q9NP81 518 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 SCHIP1Q9P0W5 487 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 FKBPLQ9UIM3 349 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 CDRT15L2A8MXV6 281 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 PLD2O14939 933 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 PRAMEF1O95521 474 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 CRTAMO95727 393 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 AP2A1O95782 977 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 HOXB3P14651 431 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 TPH1P17752 444 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 ITPKBP27987 946 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 CTSCP53634 463 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 HHEXQ03014 270 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 BIRC2Q13490 618 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 SNX1Q13596 522 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 CLPPQ16740 277 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 INSCQ1MX18 579 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 RAB11FIP2Q7L804 512 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 PRUNE1Q86TP1 453 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 C19orf43Q9BQ61 176 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 STRADBQ9C0K7 418 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 LRRC40Q9H9A6 602 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF148Q9UQR1 794 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 DNAJC16Q9Y2G8 782 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 ADAMTS20P59510 1910 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 LOC400499M0QZD8 3231 aa18.21■□□□□ 0.51
SHKBP1-202ENST00000593764 FAM208BQ5VWN6 2430 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 KIR2DS5A0A0G2JLQ3 304 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 A0A0G2JNG1 304 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 OR5K4A6NMS3 321 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 AGAP14A8MT82 685 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 KIR2DS3K7RE56 304 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 PSMD3O43242 534 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 ZW10O43264 779 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 NRDCO43847 1150 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 SRP72O76094 671 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 TNFSF15O95150 251 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 ETS1P14921 441 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 BRAFP15056 766 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 RBMS1P29558 406 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 UBE2IP63279 158 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 PDE1BQ01064 536 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 EIF3IQ13347 325 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 NFATC2Q13469 925 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 KIR2DS5Q14953 304 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 COL28A1Q2UY09 1125 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 MAP9Q49MG5 647 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 FOXR1Q6PIV2 292 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 TRAPPC5Q8IUR0 188 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 FBXO39Q8N4B4 442 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 GLIS1Q8NBF1 620 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 TTC25Q96NG3 672 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 OSGEPL1Q9H4B0 414 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 ETNK1Q9HBU6 452 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 PIH1D1Q9NWS0 290 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 KCNK4Q9NYG8 393 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 CPNE7Q9UBL6 633 aa18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 ZNF106Q9H2Y7 1883 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-202ENST00000593764 IGHV5-10-1A0A0J9YXX1 117 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 GOLGA6L3A6NEY3 463 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 CCL22O00626 93 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 IFNB1P01574 187 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 HGFP14210 728 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 SLC2A4P14672 509 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 XRCC1P18887 633 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 CSF2RBP32927 897 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 MLLT3P42568 568 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 TMPRSS15P98073 1019 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 GTF2H3Q13889 308 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 CCNG2Q16589 344 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 TMEM220Q6QAJ8 160 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 ABRAXAS1Q6UWZ7 409 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 WASH2PQ6VEQ5 465 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 MICALCLQ6ZW33 695 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 CLEC14AQ86T13 490 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 SLC9B2Q86UD5 537 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 LRRC45Q96CN5 670 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 SLC38A3Q99624 504 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 ASB8Q9H765 288 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 WASH6PQ9NQA3 447 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 THSD1Q9NS62 852 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 ZNF624Q9P2J8 865 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 RALYQ9UKM9 306 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 PTPRQQ9UMZ3 2332 aa18.19■□□□□ 0.5
SHKBP1-202ENST00000593764 AHCTF1Q8WYP5 2266 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 RRP8O43159 456 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 POP7O75817 140 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms