RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SAT1P21673 171 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 UGT1A1P22309 533 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 UGT1A4P22310 534 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 FDXRP22570 491 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 RPS3P23396 243 aaKnown RBP eCLIP13.34□□□□□ -0.278e-6■■■■■ 30.2
VMP1-217ENST00000593168 ACRV1P26436 265 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 UGT1A3P35503 534 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 UGT1A5P35504 534 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 SLC26A3P40879 764 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 ETV4P43268 484 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 SHC2P98077 582 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 SFSWAPQ12872 951 aaKnown RBP13.34□□□□□ -0.27
VMP1-217ENST00000593168 ACOX1Q15067 660 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 DBN1Q16643 649 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 HENMT1Q5T8I9 393 aaKnown RBP13.34□□□□□ -0.27
VMP1-217ENST00000593168 HHATQ5VTY9 493 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 LVRNQ6Q4G3 990 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 CEP97Q8IW35 865 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 RBFAQ8N0V3 343 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 HDDC3Q8N4P3 179 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 AADATQ8N5Z0 425 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 MGARPQ8TDB4 240 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 DTD2Q96FN9 168 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 BIRC8Q96P09 236 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 NDNQ99608 321 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 OLFM1Q99784 485 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 ZSCAN5AQ9BUG6 496 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 MKRN2Q9H000 416 aaKnown RBP13.34□□□□□ -0.27
VMP1-217ENST00000593168 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 P2RY12Q9H244 342 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 SMOC1Q9H4F8 434 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 CCDC134Q9H6E4 229 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 SMOXQ9NWM0 555 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 KCTD5Q9NXV2 234 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 ZDHHC3Q9NYG2 299 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 MMP17Q9ULZ9 603 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 ITM2BQ9Y287 266 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 LAMA1P25391 3075 aa13.33□□□□□ -0.27
VMP1-217ENST00000593168 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.27
VMP1-217ENST00000593168 A0A1W2PP55 124 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
VMP1-217ENST00000593168 PLK4O00444 970 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 NEMP1O14524 444 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 PHGDHO43175 533 aaKnown RBP13.33□□□□□ -0.28
VMP1-217ENST00000593168 LZTS3O60299 673 aaPredicted RBP13.33□□□□□ -0.28
VMP1-217ENST00000593168 WISP3O95389 354 aaPredicted RBP13.33□□□□□ -0.28
VMP1-217ENST00000593168 DHRS4L1P0CG22 281 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 GM2AP17900 193 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 FMO4P31512 558 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 CA5AP35218 305 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 ETV3P41162 512 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 CDKN2DP55273 166 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 TAS2R38P59533 333 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 GNGT1P63211 74 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 IL9RQ01113 521 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 PPARDQ03181 441 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 ZNF284Q2VY69 593 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 ATP13A5Q4VNC0 1218 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.28
VMP1-217ENST00000593168 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 CXorf40AQ8TE69 158 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 CKAP2Q8WWK9 683 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 GAB3Q8WWW8 586 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 SCAMP4Q969E2 229 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 TSNARE1Q96NA8 513 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 FAM111AQ96PZ2 611 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 VPS35Q96QK1 796 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 WRAP53Q9BUR4 548 aaKnown RBP13.33□□□□□ -0.28
VMP1-217ENST00000593168 SPATA16Q9BXB7 569 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 SLC17A7Q9P2U7 560 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 CD84Q9UIB8 345 aa13.33□□□□□ -0.28
VMP1-217ENST00000593168 IGLV3-16A0A075B6K0 115 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 GOLGA8CPA6NN73 597 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 H3BMM5 538 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 GPR39O43194 453 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 OR1I1O60431 355 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 MMP20O60882 483 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 RECQL5O94762 991 aaPredicted RBP13.32□□□□□ -0.28
VMP1-217ENST00000593168 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 KLHL2O95198 593 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 KCNK5O95279 499 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 PYGLP06737 847 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 C6P13671 934 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 LSP1P33241 339 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 SKIV2L2P42285 1042 aaKnown RBP13.32□□□□□ -0.28
VMP1-217ENST00000593168 NSG1P42857 185 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
VMP1-217ENST00000593168 DPTQ07507 201 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 LRRC14Q15048 493 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 CRY1Q16526 586 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 TSNAXIP1Q2TAA8 658 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 CCDC153Q494R4 210 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 TTC31Q49AM3 519 aaPredicted RBP13.32□□□□□ -0.28
VMP1-217ENST00000593168 CTSL3PQ5NE16 218 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 USP30Q70CQ3 517 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms