RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ZNF678Q5SXM1 525 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 OGFRL1Q5TC84 451 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 GALNT18Q6P9A2 607 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 SLC24A5Q71RS6 500 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 ERI1Q8IV48 349 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 BRI3BPQ8WY22 251 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 CYP2S1Q96SQ9 504 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 REXO4Q9GZR2 422 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 SHANK3Q9BYB0 1731 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 RNASEH2AO75792 299 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 MED26O95402 600 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 ASGR1P07306 291 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 ZBTB2Q8N680 514 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 H2AFY2Q9P0M6 372 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 FAM234BA2RU67 622 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 TRIM24O15164 1050 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 ZNF846Q147U1 533 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 SLCO6A1Q86UG4 719 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 TBC1D19Q8N5T2 526 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 OLIG1Q8TAK6 271 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 NOL6Q9H6R4 1146 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 GTF2IRD1Q9UHL9 959 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 IKZF3Q9UKT9 509 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 YAP1P46937 504 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 MLLT6P55198 1093 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 SIM2Q14190 667 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 ZNF423Q2M1K9 1284 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 XKR6Q5GH73 641 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 ERMP1Q7Z2K6 904 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 LIX1Q8N485 282 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 MARVELD2Q8N4S9 558 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 EPB41L1Q9H4G0 881 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 LIN28AQ9H9Z2 209 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 KERAO60938 352 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 ASLP04424 464 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 OR1D2P34982 312 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 ACVRL1P37023 503 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 MAPK8P45983 427 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 SNRPD1P62314 119 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 ERVK-8P63133 956 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 RFTN1Q14699 578 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 TSGA13Q96PP4 275 aa16.96■□□□□ 0.31
SMARCA4-215ENST00000590574 ZBTB42B2RXF5 422 aa16.96■□□□□ 0.3
SMARCA4-215ENST00000590574 NOBOXO60393 691 aa16.96■□□□□ 0.3
SMARCA4-215ENST00000590574 PTPRCAPQ14761 206 aa16.96■□□□□ 0.3
SMARCA4-215ENST00000590574 KCNA10Q16322 511 aa16.96■□□□□ 0.3
SMARCA4-215ENST00000590574 FGD3Q5JSP0 725 aa16.96■□□□□ 0.3
SMARCA4-215ENST00000590574 SPRYD7Q5W111 196 aa16.96■□□□□ 0.3
SMARCA4-215ENST00000590574 UBE2R2Q712K3 238 aaPredicted RBP16.96■□□□□ 0.3
SMARCA4-215ENST00000590574 HNRNPCL2B2RXH8 293 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 BCKDKO14874 412 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 NIPSNAP2O75323 286 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 CNMDO75829 334 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 PRAMEF1O95521 474 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 ALDH6A1Q02252 535 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 IKBKEQ14164 716 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 C14orf80Q86SX3 495 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 SMG8Q8ND04 991 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 CDKN2AIPNLQ96HQ2 116 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 TTPALQ9BTX7 342 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 CEP44Q9C0F1 390 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 KRT84Q9NSB2 600 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 GLYATL1P3A0A0U1RQE8 302 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 FADS2O95864 444 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 PRKAR2AP13861 404 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 CD68P34810 354 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 FKBP1BP68106 108 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 ACOX1Q15067 660 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 KBTBD6Q86V97 674 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 PACRGLQ8N7B6 248 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 GPR156Q8NFN8 814 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 PSMA8Q8TAA3 256 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 GATA6Q92908 595 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 ZHX1-C8orf76Q96EF9 292 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 WDR83Q9BRX9 315 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 LRRC3Q9BY71 257 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 MTMR10Q9NXD2 777 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 NHSQ6T4R5 1651 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 NADKO95544 446 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 CYP2A6P11509 494 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 CDH3P22223 829 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 TECRLQ5HYJ1 363 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 INTS11Q5TA45 600 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 REPS1Q96D71 796 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 COPS8Q99627 209 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 ASNA1O43681 348 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 IGFBP5P24593 272 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 GRB14Q14449 540 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 ARL10Q8N8L6 244 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 MRGPRX2Q96LB1 330 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 APOLD1Q96LR9 279 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 TMEM209Q96SK2 561 aa16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 SAMD4AQ9UPU9 718 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-215ENST00000590574 HTRA2O43464 458 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 GSK3BP49841 420 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 MRPL28Q13084 256 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms