RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 FAM109AQ8N4B1 249 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 MTMR14Q8NCE2 650 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 ZNF555Q8NEP9 628 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 FKBP14Q9NWM8 211 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 EHD3Q9NZN3 535 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 INTS6Q9UL03 887 aaKnown RBP15.06■□□□□ 0
CIRBP-228ENST00000590347 CEP350Q5VT06 3117 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 TANC1Q9C0D5 1861 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 TTC24A2A3L6 582 aaPredicted RBP15.06■□□□□ 0
CIRBP-228ENST00000590347 ANGPTL1O95841 491 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 GPX3P22352 226 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 HRH2P25021 359 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 MAGEA12P43365 314 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 CLCA4Q14CN2 919 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 PGM5Q15124 567 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
CIRBP-228ENST00000590347 NCBP2-AS2Q69YL0 99 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 CES5AQ6NT32 575 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 ENPP6Q6UWR7 440 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 MOB2Q70IA6 237 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 ZC3HC1Q86WB0 502 aaKnown RBP15.06■□□□□ 0
CIRBP-228ENST00000590347 ZDHHC13Q8IUH4 622 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 TUBGCP3Q96CW5 907 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 MCRS1Q96EZ8 462 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 ZNF300Q96RE9 604 aaPredicted RBP15.06■□□□□ 0
CIRBP-228ENST00000590347 HBEGFQ99075 208 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 TAS2R9Q9NYW1 312 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 BFARQ9NZS9 450 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 MORF4L1Q9UBU8 362 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 TCRBV5S2A0A599 114 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 AGAP5A6NIR3 686 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 H0Y626 953 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 UPK1AO00322 258 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 PTPRAP18433 802 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 CD6P30203 668 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 GPD2P43304 727 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 SELPLGQ14242 412 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 ZNF404Q494X3 552 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 TRIM60Q495X7 471 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 RBM20Q5T481 1227 aaKnown RBP15.06■□□□□ 0
CIRBP-228ENST00000590347 LDB1Q86U70 411 aaPredicted RBP15.06■□□□□ 0
CIRBP-228ENST00000590347 CHAC2Q8WUX2 184 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 BTN2A3PQ96KV6 586 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 QKIQ96PU8 341 aaKnown RBP eCLIP15.06■□□□□ 0
CIRBP-228ENST00000590347 PHOX2BQ99453 314 aa15.06■□□□□ 0
CIRBP-228ENST00000590347 ATP6V1G2-DDX39BF2Z307 99 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 G3V2T6 193 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 HCRTO43612 131 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 PRSS23O95084 383 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 APOA1P02647 267 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 BACE1P56817 501 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 ZNF789Q5FWF6 425 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 ZMAT1Q5H9K5 638 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 PRSS36Q5K4E3 855 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 NECAB2Q7Z6G3 386 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 TMEM179BQ7Z7N9 219 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 PPP1R13LQ8WUF5 828 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 TMEM174Q8WUU8 243 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 NUP205Q92621 2012 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 UCK2Q9BZX2 261 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 RIBC2Q9H4K1 309 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 POLR3BQ9NW08 1133 aaPredicted RBP15.05■□□□□ -0
CIRBP-228ENST00000590347 OR6C70A6NIJ9 312 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 CCL22O00626 93 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 H2AFYO75367 372 aaKnown RBP15.05■□□□□ -0
CIRBP-228ENST00000590347 PITX1P78337 314 aaPredicted RBP15.05■□□□□ -0
CIRBP-228ENST00000590347 RBM48Q5RL73 367 aaKnown RBP15.05■□□□□ -0
CIRBP-228ENST00000590347 AHSA2Q719I0 299 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 AMIGO1Q86WK6 493 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 PIK3C3Q8NEB9 887 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 PDCD2LQ9BRP1 358 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 TBCDQ9BTW9 1192 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 SLC2A6Q9UGQ3 507 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 PCDHGA10Q9Y5H3 936 aa15.05■□□□□ -0
CIRBP-228ENST00000590347 A0A1B0GTL3 188 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 FAM95CA0A1B0GW59 222 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 CTDSP2O14595 271 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 POLR1CO15160 346 aaPredicted RBP15.04■□□□□ -0
CIRBP-228ENST00000590347 POU3F3P20264 500 aaPredicted RBP15.04■□□□□ -0
CIRBP-228ENST00000590347 CDH5P33151 784 aaPredicted RBP15.04■□□□□ -0
CIRBP-228ENST00000590347 ZMYND11Q15326 602 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 SPANXN3Q5MJ09 141 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 ZNF544Q6NX49 715 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 C8orf82Q6P1X6 216 aaPredicted RBP15.04■□□□□ -0
CIRBP-228ENST00000590347 ZNF540Q8NDQ6 660 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 SH3RF2Q8TEC5 729 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 TMEM125Q96AQ2 219 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 NSUN5Q96P11 429 aaKnown RBP15.04■□□□□ -0
CIRBP-228ENST00000590347 SNX18Q96RF0 628 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 C2orf49Q9BVC5 232 aaPredicted RBP15.04■□□□□ -0
CIRBP-228ENST00000590347 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 R3HDMLQ9H3Y0 253 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 RETREG1Q9H6L5 497 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 UBA2Q9UBT2 640 aaPredicted RBP15.04■□□□□ -0
CIRBP-228ENST00000590347 CIB4A0PJX0 185 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 A8MT66 165 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 PIP5K1BO14986 540 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 GJB1P08034 283 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 HGFP14210 728 aa15.04■□□□□ -0
CIRBP-228ENST00000590347 RRM2P31350 389 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms