RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PDX1P52945 283 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 PDE1BQ01064 536 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 HHEXQ03014 270 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 ZFP36L1Q07352 338 aaKnown RBP11.91□□□□□ -0.5
TPM4-212ENST00000590180 SEPT7Q16181 437 aaKnown RBP11.91□□□□□ -0.5
TPM4-212ENST00000590180 COL28A1Q2UY09 1125 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 GPRC6AQ5T6X5 926 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 DENND5AQ6IQ26 1287 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 TMEM220Q6QAJ8 160 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 ZNF438Q7Z4V0 828 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 JAMLQ86YT9 394 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 RASGEF1AQ8N9B8 481 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 TRIM58Q8NG06 486 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 SH3KBP1Q96B97 665 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 LIN37Q96GY3 246 aaPredicted RBP11.91□□□□□ -0.5
TPM4-212ENST00000590180 ZCCHC2Q9C0B9 1178 aaKnown RBP11.91□□□□□ -0.5
TPM4-212ENST00000590180 SEMA6CQ9H3T2 930 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 FAM96AQ9H5X1 160 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 LRRC40Q9H9A6 602 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 ARNT2Q9HBZ2 717 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 WDR70Q9NW82 654 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 AKAP7Q9P0M2 348 aaPredicted RBP11.91□□□□□ -0.5
TPM4-212ENST00000590180 CPNE7Q9UBL6 633 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 LHX6Q9UPM6 363 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 PCDHGA8Q9Y5G5 932 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 A0A087WV48 116 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 IGHV1OR21-1A0A087WYE8 117 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 KIR2DS5A0A0G2JLQ3 304 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 A0A0G2JNG1 304 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 OR2AG2A6NM03 316 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 E7EVH7 732 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 KIR2DS3K7RE56 304 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 PLD2O14939 933 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 SRP72O76094 671 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 DXOO77932 396 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 PRAMEF1O95521 474 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 VIPP01282 170 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 JMJD7P0C870 316 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 HGFP14210 728 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 ETS1P14921 441 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 MPSTP25325 297 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 RPL10P27635 214 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 MAPK9P45984 424 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 FASLGP48023 281 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 CLCNKAP51800 687 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 PCBP4P57723 403 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 ERVPABLB-1P60509 514 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 EIF3IQ13347 325 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 MSLNQ13421 630 aaPredicted RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 SEPT6Q14141 434 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 KIR2DS5Q14953 304 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 NR1D2Q14995 579 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 KCTD11Q693B1 232 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 ZNF574Q6ZN55 896 aaPredicted RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 DET1Q7L5Y6 550 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 TMPRSS9Q7Z410 1059 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 PRUNE1Q86TP1 453 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 AMZ2Q86W34 360 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 ZNF547Q8IVP9 402 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 TRIM48Q8IWZ4 208 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 CCDC89Q8N998 374 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 DNAAF3Q8N9W5 541 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 ZNF248Q8NDW4 579 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 OR13C4Q8NGS5 318 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 OR10G6Q8NH81 332 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 MAIP1Q8WWC4 291 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 DCUN1D1Q96GG9 259 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 PRR11Q96HE9 360 aaPredicted RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 CMKLR1Q99788 373 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 NUDT22Q9BRQ3 303 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 TIMM29Q9BSF4 260 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 ETNK1Q9HBU6 452 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 SARS2Q9NP81 518 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 ASCL3Q9NQ33 180 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 PIH1D1Q9NWS0 290 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 PISDQ9UG56 409 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 CRLS1Q9UJA2 301 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
TPM4-212ENST00000590180 LOXL2Q9Y4K0 774 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 ZFYVE26Q68DK2 2539 aa11.9□□□□□ -0.5
TPM4-212ENST00000590180 DMXL2Q8TDJ6 3036 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 CHD6Q8TD26 2715 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 CCL22O00626 93 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 GAPDHSO14556 408 aaPredicted RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 KCNJ13O60928 360 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 AP2A1O95782 977 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 GAS8O95995 478 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 FGGP02679 453 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 PBLDP30039 288 aaPredicted RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 CXCR5P32302 372 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 FDFT1P37268 417 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 HADHAP40939 763 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 ABCG1P45844 678 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 CTSCP53634 463 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 MAPK10P53779 464 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 DRG2P55039 364 aaKnown RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 GPLD1P80108 840 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms