RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ADNPQ9H2P0 1102 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 TRIT1Q9H3H1 467 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 UBP1Q9NZI7 540 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 SLC23A2Q9UGH3 650 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 UBR5O95071 2799 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 CYSRT1A8MQ03 144 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 MFAP3LO75121 409 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 MTX2O75431 263 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 STK17BO94768 372 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 UBXN7O94888 489 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 TYRP1P17643 537 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 VCLP18206 1134 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 PTPN3P26045 913 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 CCR10P46092 362 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 SEPT7Q16181 437 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 MFSD7Q6UXD7 560 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 TMEM26Q6ZUK4 368 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 GDAP1Q8TB36 358 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 TFB1MQ8WVM0 346 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 SLC45A3Q96JT2 553 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 C9orf72Q96LT7 481 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 SPRY4Q9C004 299 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 TRIM4Q9C037 500 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 APMAPQ9HDC9 416 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 BPIFA1Q9NP55 256 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 SCHIP1Q9P0W5 487 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 INTUQ9ULD6 942 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 HYOU1Q9Y4L1 999 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 SPO11Q9Y5K1 396 aa17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 MN1Q10571 1320 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-211ENST00000590098 MTSS1O43312 755 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 SUV39H1O43463 412 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 ANKRD34CP0C6C1 535 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 COMTP21964 271 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 IDSP22304 550 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 SLC19A1P41440 591 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 CSRP3P50461 194 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 FOXM1Q08050 763 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 ABHD18Q0P651 414 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 KCNAB2Q13303 367 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 GTF2H3Q13889 308 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 PRKD1Q15139 912 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 KAZNQ674X7 775 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 CXorf40BQ96DE9 158 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 TTC25Q96NG3 672 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 TGM7Q96PF1 710 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 VPS35Q96QK1 796 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 TRABDQ9H4I3 376 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 ZNF624Q9P2J8 865 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 SAE1Q9UBE0 346 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 IL17BQ9UHF5 180 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 FAM153AQ9UHL3 310 aa17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 TMEM184BQ9Y519 407 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-211ENST00000590098 ZNF106Q9H2Y7 1883 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 LOC101059948A0A1B0GTJ6 334 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 AURKAO14965 403 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 CST8O60676 142 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 C9P02748 559 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 PRKAR1AP10644 381 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 RPL10P27635 214 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 CDKN2BP42772 138 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 GFERP55789 205 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 POLE2P56282 527 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 WNT3AP56704 352 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 TMEM115Q12893 351 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 SKOR2Q2VWA4 1001 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 ATP13A5Q4VNC0 1218 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 ABRAXAS1Q6UWZ7 409 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 TIPARPQ7Z3E1 657 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 TRAPPC5Q8IUR0 188 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 CNGA4Q8IV77 575 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 ZNF547Q8IVP9 402 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 RBM12BQ8IXT5 1001 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 UNC5BQ8IZJ1 945 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 BRSK1Q8TDC3 778 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 P3H4Q92791 437 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 POT1Q9NUX5 634 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 OGFRQ9NZT2 677 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 SLC30A1Q9Y6M5 507 aa17.65■□□□□ 0.42
PRKCSH-211ENST00000590098 HECTD1Q9ULT8 2610 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 TERTO14746 1132 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 TOX3O15405 576 aaPredicted RBP17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 NKX2-8O15522 239 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 PSTPIP1O43586 416 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 RASSF9O75901 435 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 EPOP01588 193 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 NFKB1P19838 968 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 HMGCLP35914 325 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 HALP42357 657 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 DRG2P55039 364 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 MC1RQ01726 317 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 WASHC5Q12768 1159 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 TCEAL1Q15170 157 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 LLGL1Q15334 1064 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 TAZQ16635 292 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 KHDC1Q4VXA5 237 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 AGAP9Q5VTM2 703 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 ZDHHC20Q5W0Z9 365 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 WASH2PQ6VEQ5 465 aa17.64■□□□□ 0.41
PRKCSH-211ENST00000590098 SPOCD1Q6ZMY3 1216 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms