RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MIPP30301 263 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 MMP13P45452 471 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 FAM182AQ5T1J6 154 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 HENMT1Q5T8I9 393 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 PHYKPLQ8IUZ5 450 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 AOPEPQ8N6M6 819 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 OR2AG1Q9H205 316 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 CHST8Q9H2A9 424 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 TRIM10Q9UDY6 481 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 FARSAQ9Y285 508 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 PIKFYVEQ9Y2I7 2098 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 ANKRD62A6NC57 917 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 TMEM63AO94886 807 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 SLC2A4P14672 509 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF30P17039 623 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 LPOP22079 712 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 HSPA9P38646 679 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 DRG2P55039 364 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 RPS15P62841 145 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 DSC2Q02487 901 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 CDK18Q07002 472 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 DPCR1Q3MIW9 517 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 TRIM48Q8IWZ4 208 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 RHOT1Q8IXI2 618 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 MCOLN2Q8IZK6 566 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 ENDOVQ8N8Q3 282 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 SIDT2Q8NBJ9 832 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 LRRN4Q8WUT4 740 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 MR1Q95460 341 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 EID2BQ96D98 161 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 SLC41A2Q96JW4 573 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 MLPHQ9BV36 600 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 CARD9Q9H257 536 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 PDE7BQ9NP56 450 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 SLC40A1Q9NP59 571 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 WDR37Q9Y2I8 494 aa12.54□□□□□ -0.4
PRKCSH-210ENST00000589990 PDZK1P1A8MUH7 402 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 MASP2O00187 686 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 MTX2O75431 263 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 PYGLP06737 847 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 IL1R2P27930 398 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 CA5AP35218 305 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 SPINT3P49223 89 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 CLCNKAP51800 687 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 ITKQ08881 620 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 GPR19Q15760 415 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 KHDC1Q4VXA5 237 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 CRB2Q5IJ48 1285 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 MARC1Q5VT66 337 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 CAVIN1Q6NZI2 390 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF517Q6ZMY9 492 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 ADGRG6Q86SQ4 1221 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF547Q8IVP9 402 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 TTC30BQ8N4P2 665 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 MLKLQ8NB16 471 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 GPR150Q8NGU9 434 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 PPM1MQ96MI6 270 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 SMAD5Q99717 465 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 MAP3K3Q99759 626 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 RMI1Q9H9A7 625 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 FGF21Q9NSA1 209 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 GPR83Q9NYM4 423 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 PCDHGB7Q9Y5F8 929 aa12.53□□□□□ -0.4
PRKCSH-210ENST00000589990 C1orf232A0A0U1RR37 186 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 HNRNPRO43390 633 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 SCRG1O75711 98 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 CAPN1P07384 714 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 HCAR3P49019 387 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 EPHB1P54762 984 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 ATP1A4Q13733 1029 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 INSCQ1MX18 579 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 ALS2CLQ60I27 953 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 TXNRD3NBQ6F5E7 133 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 MCEMP1Q8IX19 187 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 IQCKQ8N0W5 287 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 LPCAT1Q8NF37 534 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 SEC14L1Q92503 715 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 ZDHHC12Q96GR4 267 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 ZNF514Q96K75 400 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 AGPAT1Q99943 283 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 TDRD1Q9BXT4 1180 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 FAM83DQ9H4H8 585 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 ZBTB20Q9HC78 741 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 TMEM63CQ9P1W3 806 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 SEMA5BQ9P283 1151 aa12.52□□□□□ -0.41
PRKCSH-210ENST00000589990 EPHA6Q9UF33 1036 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms