RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 WASHC5Q12768 1159 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 LLGL1Q15334 1064 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 SNAP47Q5SQN1 464 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 FAM182AQ5T1J6 154 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 ZNF648Q5T619 568 aaPredicted RBP14.16□□□□□ -0.14
MBD1-220ENST00000589758 KAZNQ674X7 775 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 PID1Q7Z2X4 250 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 ARHGAP22Q7Z5H3 698 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 PLXDC1Q8IUK5 500 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 IL22RA1Q8N6P7 574 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 DTX3LQ8TDB6 740 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 BRSK1Q8TDC3 778 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 ANP32BQ92688 251 aaKnown RBP14.16□□□□□ -0.14
MBD1-220ENST00000589758 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
MBD1-220ENST00000589758 FCRL5Q96RD9 977 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 TIMM29Q9BSF4 260 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 OSGEPL1Q9H4B0 414 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 ARFGAP3Q9NP61 516 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 PRDM8Q9NQV8 689 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 UBP1Q9NZI7 540 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 HACD3Q9P035 362 aa14.16□□□□□ -0.14
MBD1-220ENST00000589758 KLHL8Q9P2G9 620 aaPredicted RBP14.16□□□□□ -0.14
MBD1-220ENST00000589758 AHCTF1Q8WYP5 2266 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 hCG_1818297A0A087WSY0 165 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 HACD1B0YJ81 288 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 J3QKU1 62 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 KCNJ13O60928 360 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 VIPP01282 170 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 PECAM1P16284 738 aaPredicted RBP14.15□□□□□ -0.14
MBD1-220ENST00000589758 VCLP18206 1134 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 NFKB1P19838 968 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 CD68P34810 354 aaPredicted RBP14.15□□□□□ -0.14
MBD1-220ENST00000589758 MAPK9P45984 424 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 MARCKSL1P49006 195 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 WNT3AP56704 352 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 UBE2IP63279 158 aaKnown RBP14.15□□□□□ -0.14
MBD1-220ENST00000589758 CCZ1BP86790 482 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 CCZ1P86791 482 aaPredicted RBP14.15□□□□□ -0.14
MBD1-220ENST00000589758 MPP3Q13368 585 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 GTF2H3Q13889 308 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 LINC00303Q3SY05 128 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 CRTC3Q6UUV7 619 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 KDELC1Q6UW63 502 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 CEACAM20Q6UY09 585 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 CCDC50Q8IVM0 306 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 TRIM48Q8IWZ4 208 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 CACNA2D3Q8IZS8 1091 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 BMPERQ8N8U9 685 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 HTR3CQ8WXA8 447 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 JPH3Q8WXH2 748 aaPredicted RBP14.15□□□□□ -0.14
MBD1-220ENST00000589758 EXTL1Q92935 676 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 TBC1D10AQ9BXI6 508 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 FBXO8Q9NRD0 319 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 TRHDEQ9UKU6 1024 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 SPO11Q9Y5K1 396 aa14.15□□□□□ -0.14
MBD1-220ENST00000589758 SDK2Q58EX2 2172 aa14.15□□□□□ -0.15
MBD1-220ENST00000589758 GRID2IPA4D2P6 1211 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 PDZK1P1A8MUH7 402 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 AURKAO14965 403 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 CAPN5O15484 640 aaPredicted RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 NRDCO43847 1150 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 RAD1O60671 282 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 ANKRD34CP0C6C1 535 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 HLA-DPA1P20036 260 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 IDSP22304 550 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 TMEM115Q12893 351 aaPredicted RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 XRCC4Q13426 336 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 ATP13A5Q4VNC0 1218 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 SIRPB2Q5JXA9 342 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 ANKS6Q68DC2 871 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 ABRAXAS1Q6UWZ7 409 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 WASH2PQ6VEQ5 465 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 TMEM26Q6ZUK4 368 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 ZC3H18Q86VM9 953 aaKnown RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 RBM12BQ8IXT5 1001 aaKnown RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 ZNF567Q8N184 647 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 GDAP1Q8TB36 358 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 KRT35Q92764 455 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 PMEPA1Q969W9 287 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 RTP4Q96DX8 246 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 CALR3Q96L12 384 aaKnown RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 MRGPRX2Q96LB1 330 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 TTC25Q96NG3 672 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 FERMT1Q9BQL6 677 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 ZCCHC2Q9C0B9 1178 aaKnown RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 BPIFA1Q9NP55 256 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 WASH6PQ9NQA3 447 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 POT1Q9NUX5 634 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 SLC23A2Q9UGH3 650 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
MBD1-220ENST00000589758 MN1Q10571 1320 aaPredicted RBP14.14□□□□□ -0.15
MBD1-220ENST00000589758 MGAQ8IWI9 3026 aa14.13□□□□□ -0.15
MBD1-220ENST00000589758 TOX3O15405 576 aaPredicted RBP14.13□□□□□ -0.15
MBD1-220ENST00000589758 PPFIA2O75334 1257 aa14.13□□□□□ -0.15
MBD1-220ENST00000589758 MTX2O75431 263 aa14.13□□□□□ -0.15
MBD1-220ENST00000589758 UBXN7O94888 489 aa14.13□□□□□ -0.15
MBD1-220ENST00000589758 WT1P19544 449 aaPredicted RBP14.13□□□□□ -0.15
MBD1-220ENST00000589758 MAP4P27816 1152 aaKnown RBP14.13□□□□□ -0.15
MBD1-220ENST00000589758 SPAM1P38567 509 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms