RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 NPHS1O60500 1241 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 SYNCRIPO60506 623 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 KERAO60938 352 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 SMIM24O75264 130 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 IPO13O94829 963 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 KIAA0754O94854 1291 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 ADH1BP00325 375 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 CA5AP35218 305 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 ETV3P41162 512 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 PSMD8P48556 350 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 LIG3P49916 1009 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 HK2P52789 917 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 HNRNPH2P55795 449 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 CREB5Q02930 508 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 CCDC15Q0P6D6 951 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 IFT88Q13099 833 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 RCN2Q14257 317 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 ACOX1Q15067 660 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 GLIPR1L2Q4G1C9 344 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 GPRC6AQ5T6X5 926 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 ERMP1Q7Z2K6 904 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 TRMT11Q7Z4G4 463 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 WDR75Q8IWA0 830 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 SIDT2Q8NBJ9 832 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 TXNDC5Q8NBS9 432 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 DDHD1Q8NEL9 900 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 GIMAP7Q8NHV1 300 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 INPP5DQ92835 1189 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 PTERQ96BW5 349 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 DTD2Q96FN9 168 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 MSANTD3Q96H12 275 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 SORT1Q99523 831 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 PHF7Q9BWX1 381 aaPredicted RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 UNKQ9C0B0 810 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 C20orf27Q9GZN8 174 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 DRC3Q9H069 523 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 STN1Q9H668 368 aaKnown RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 LATS2Q9NRM7 1088 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 FAM86C1Q9NVL1 165 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 NCKIPSDQ9NZQ3 722 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 TMCO1Q9UM00 188 aa11.93□□□□□ -0.5
CCBE1-203ENST00000589116 MTF2Q9Y483 593 aaPredicted RBP11.93□□□□□ -0.5
CCBE1-203ENST00000589116 PIKFYVEQ9Y2I7 2098 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 C5orf42Q9H799 3197 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 CFAP54Q96N23 3096 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 CCT8L1PA6NM43 557 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 SYCE1LA8MT33 242 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 EIF3FO00303 357 aaPredicted RBP11.92□□□□□ -0.5
CCBE1-203ENST00000589116 QSOX1O00391 747 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 ITM2AO43736 263 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 MAGEC1O60732 1142 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 DCTN3O75935 186 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 HSPA4LO95757 839 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 TSPAN12O95859 305 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 OR56A5P0C7T3 313 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 TPBGLP0DKB5 382 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 GLULP15104 373 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 DRD1P21728 446 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 NTSR1P30989 418 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 RGS4P49798 205 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 METAP1P53582 386 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 ZP2Q05996 745 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 CST6Q15828 149 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 TTLL9Q3SXZ7 439 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 TMEM196Q5HYL7 178 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 LDLRAP1Q5SW96 308 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 IER5LQ5T953 404 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 SDE2Q6IQ49 451 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 TXNDC11Q6PKC3 985 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 NAPRTQ6XQN6 538 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 TRPM8Q7Z2W7 1104 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 GBP7Q8N8V2 638 aaPredicted RBP11.92□□□□□ -0.5
CCBE1-203ENST00000589116 EZH1Q92800 747 aaPredicted RBP11.92□□□□□ -0.5
CCBE1-203ENST00000589116 SCAMP4Q969E2 229 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 SGF29Q96ES7 293 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 LINGO1Q96FE5 620 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 DCUN1D1Q96GG9 259 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 ATOH8Q96SQ7 321 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 SLC30A3Q99726 388 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 GABRG3Q99928 467 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 RIOK2Q9BVS4 552 aaKnown RBP11.92□□□□□ -0.5
CCBE1-203ENST00000589116 ABCG8Q9H221 673 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 KCNK12Q9HB15 430 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
CCBE1-203ENST00000589116 KCTD5Q9NXV2 234 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 GALPQ9UBC7 116 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 CD84Q9UIB8 345 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 HAO1Q9UJM8 370 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 ITM2BQ9Y287 266 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 DNAJC16Q9Y2G8 782 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 PRSS21Q9Y6M0 314 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 PIAS3Q9Y6X2 628 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 LRRK1Q38SD2 2015 aa11.92□□□□□ -0.5
CCBE1-203ENST00000589116 NEMP1O14524 444 aa11.91□□□□□ -0.5
CCBE1-203ENST00000589116 AP1G1O43747 822 aa11.91□□□□□ -0.5
CCBE1-203ENST00000589116 LYPLA1O75608 230 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-203ENST00000589116 AP2A2O94973 939 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms