RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 MXI1P50539 228 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 AP3M2P53677 418 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 TNNC1P63316 161 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 SRSF5Q13243 272 aaKnown RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 ZNF699Q32M78 642 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 NRN1LQ496H8 165 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CBWD6Q4V339 395 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 SLC39A12Q504Y0 691 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 HSP90AA4PQ58FG1 418 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CBWD3Q5JTY5 395 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 WDR45BQ5MNZ6 344 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CBWD5Q5RIA9 395 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CCDC183Q5T5S1 534 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 N4BP2L1Q5TBK1 243 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CYP4A22Q5TCH4 519 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 B3GNTL1Q67FW5 361 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 SLC9A4Q6AI14 798 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 ANO7Q6IWH7 933 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CAVIN1Q6NZI2 390 aaKnown RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 Q6ZS52 159 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 METTL23Q86XA0 190 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 IZUMO1Q8IYV9 350 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 OR4N4Q8N0Y3 316 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 TTC9BQ8N6N2 239 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 MLKLQ8NB16 471 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 LEMD2Q8NC56 503 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 ZNF461Q8TAF7 563 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 SLC35C1Q96A29 364 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 LOXL4Q96JB6 756 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 DCLRE1CQ96SD1 692 aaKnown RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 MMS19Q96T76 1030 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 MRPL45Q9BRJ2 306 aaKnown RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 AMBRA1Q9C0C7 1298 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CCDC134Q9H6E4 229 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 SMYD3Q9H7B4 428 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 RMI1Q9H9A7 625 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 PLEKHA2Q9HB19 425 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 TRPV4Q9HBA0 871 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 CYP4F11Q9HBI6 524 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 ASAH2Q9NR71 780 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 TMLHEQ9NVH6 421 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 GDAP2Q9NXN4 497 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 DDX43Q9NXZ2 648 aaKnown RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 ARMCX3Q9UH62 379 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 RWDD2AQ9UIY3 292 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 ZFR2Q9UPR6 939 aaKnown RBP7.88□□□□□ -1.15
ATG4D-210ENST00000588972 NME7Q9Y5B8 376 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 INSL5Q9Y5Q6 135 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 PTPRDP23468 1912 aa7.88□□□□□ -1.15
ATG4D-210ENST00000588972 LOC400499M0QZD8 3231 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 NCANO14594 1321 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 MTMR11A4FU01 709 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 SAC3D1A6NKF1 404 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 OR6C75A6NL08 312 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 CAPN14A8MX76 684 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 IKBKBO14920 756 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 ATP2C2O75185 946 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 EPN2O95208 641 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 LMO2P25791 158 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 HOXA6P31267 233 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 CDH8P55286 799 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 GPR17Q13304 367 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 SF3A2Q15428 464 aaKnown RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 BAK1Q16611 211 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 GEN1Q17RS7 908 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 TBRG1Q3YBR2 411 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 TPGS2Q68CL5 300 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 KRT39Q6A163 491 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 Q6ZRM9 215 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 C11orf57Q6ZUT1 292 aaPredicted RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 LIMS2Q7Z4I7 341 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 WDR5BQ86VZ2 330 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 MFSD6LQ8IWD5 586 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 THEM5Q8N1Q8 247 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 TMEM86AQ8N2M4 240 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 TMEM132CQ8N3T6 1108 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 GALNT4Q8N4A0 578 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 ATAD1Q8NBU5 361 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 SEMA4DQ92854 862 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 SYAP1Q96A49 352 aaPredicted RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 FAM136AQ96C01 138 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 RSRC1Q96IZ7 334 aaKnown RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 CNOT6LQ96LI5 555 aaKnown RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 GPR87Q9BY21 358 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 SDCBP2Q9H190 292 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 DPEP3Q9H4B8 488 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 SLITRK6Q9H5Y7 841 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 C8orf33Q9H7E9 229 aaPredicted RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 APOBEC3GQ9HC16 384 aaKnown RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 STEAP1Q9UHE8 339 aa7.87□□□□□ -1.15
ATG4D-210ENST00000588972 EIF2B4Q9UI10 523 aaKnown RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 DRG1Q9Y295 367 aaKnown RBP7.87□□□□□ -1.15
ATG4D-210ENST00000588972 DMXL2Q8TDJ6 3036 aa7.86□□□□□ -1.15
ATG4D-210ENST00000588972 AKAP13Q12802 2813 aa7.86□□□□□ -1.15
ATG4D-210ENST00000588972 ITPR1Q14643 2758 aa7.86□□□□□ -1.15
ATG4D-210ENST00000588972 NUP210Q8TEM1 1887 aaPredicted RBP7.86□□□□□ -1.15
ATG4D-210ENST00000588972 HEPACAM2A8MVW5 462 aa7.86□□□□□ -1.15
ATG4D-210ENST00000588972 GOLGA6L6A8MZA4 724 aa7.86□□□□□ -1.15
ATG4D-210ENST00000588972 SPECC1L-ADORA2AF8WAN1 911 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms