RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 VIMP08670 466 aaKnown RBP25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 CPA3P15088 417 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 CD1DP15813 335 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 KCNA4P22459 653 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 KPNA2P52292 529 aaKnown RBP25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 ACAP2Q15057 778 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 RDH11Q8TC12 318 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 SCYL1Q96KG9 808 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 CCT8L2Q96SF2 557 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 MRPL57Q9BQC6 102 aaKnown RBP25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 MRPL46Q9H2W6 279 aaKnown RBP25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 WNT16Q9UBV4 365 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 CNOT6Q9ULM6 557 aaKnown RBP25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 IGLON5A6NGN9 336 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 KLF11O14901 512 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 PCDH8O95206 1070 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 FAM107AO95990 144 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 NDUFV2P19404 249 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 AGERQ15109 404 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 CES4AQ5XG92 561 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 C10orf107Q8IVU9 208 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 TRPM6Q9BX84 2022 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 MTX2O75431 263 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 TARSP26639 723 aaKnown RBP25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 TTC31Q49AM3 519 aaPredicted RBP25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 LDLRAP1Q5SW96 308 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 SEL1L3Q68CR1 1132 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 UGT3A1Q6NUS8 523 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 USP30Q70CQ3 517 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 ISCA2Q86U28 154 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 BCAS4Q8TDM0 211 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 GANCQ8TET4 914 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 DERL2Q9GZP9 239 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 SLCO1B3Q9NPD5 702 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 FZD4Q9ULV1 537 aa25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 ZFR2Q9UPR6 939 aaKnown RBP25.72■■□□□ 1.71
SCAMP4-210ENST00000588555 SGTAO43765 313 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 ZBTB14O43829 449 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 TM7SF2O76062 418 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 SLC25A14O95258 325 aaPredicted RBP25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 FGF3P11487 239 aaPredicted RBP25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 ATP1B2P14415 290 aaPredicted RBP25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 TFEBP19484 476 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 AKT1P31749 480 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 ADPRHP54922 357 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 KLC3Q6P597 504 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 ZYG11AQ6WRX3 759 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 SYNPOQ8N3V7 929 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 NKAPQ8N5F7 415 aaKnown RBP25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 RAB3IL1Q8TBN0 382 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 PTERQ96BW5 349 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 FAM107BQ9H098 131 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 SARS2Q9NP81 518 aaKnown RBP25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 LATS2Q9NRM7 1088 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 FGFR1OP2Q9NVK5 253 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 MID2Q9UJV3 735 aa25.71■■□□□ 1.71
SCAMP4-210ENST00000588555 NUMA1Q14980 2115 aa25.7■■□□□ 1.71
SCAMP4-210ENST00000588555 TCRBV21S2A2A0A5A6 115 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 CHURC1-FNTBB4DL54 471 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 GABRG2P18507 467 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 STARD6P59095 220 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 FZD5Q13467 585 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 CHI3L2Q15782 390 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 TRIM42Q8IWZ5 723 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 OR14C36Q8NHC7 312 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 KCTD5Q9NXV2 234 aa25.7■■□□□ 1.7
SCAMP4-210ENST00000588555 RBP1P09455 135 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 ITGB6P18564 788 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 TMEM259Q4ZIN3 620 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 ZNF648Q5T619 568 aaPredicted RBP25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 RAET1GQ6H3X3 334 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 KBTBD6Q86V97 674 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 PHYKPLQ8IUZ5 450 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 CPNE9Q8IYJ1 553 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 OR6Y1Q8NGX8 325 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 EEF1AKMT1Q8WVE0 214 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 INPP5DQ92835 1189 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 DCUN1D1Q96GG9 259 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 LTB4R2Q9NPC1 389 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 OXSMQ9NWU1 459 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 THEGQ9P2T0 379 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 CFAP99D6REC4 459 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 INPP4BO15327 924 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 TRIM16O95361 564 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 OR56A5P0C7T3 313 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 MYL2P10916 166 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 NEFHP12036 1026 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 GPR1P46091 355 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 KCNC1P48547 511 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 FGL2Q14314 439 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 FAM47EQ6ZV65 393 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 DET1Q7L5Y6 550 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 PLA2G15Q8NCC3 412 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 ALG9Q9H6U8 611 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 LMAN1LQ9HAT1 526 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 CD93Q9NPY3 652 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 SPATS2LQ9NUQ6 558 aaKnown RBP25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 IKZF3Q9UKT9 509 aa25.69■■□□□ 1.7
SCAMP4-210ENST00000588555 EDF1O60869 148 aaKnown RBP25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 AP2A2O94973 939 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms