RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FOXN2P32314 431 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 MAGEA3P43357 314 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 DUSP3P51452 185 aaPredicted RBP19.93■□□□□ 0.78
DDX39A-207ENST00000588542 CTSCP53634 463 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 CACNG1Q06432 222 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 DHX34Q14147 1143 aaKnown RBP19.93■□□□□ 0.78
DDX39A-207ENST00000588542 ZRANB3Q5FWF4 1079 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 ZNF572Q7Z3I7 529 aaPredicted RBP19.93■□□□□ 0.78
DDX39A-207ENST00000588542 RAB44Q7Z6P3 723 aaPredicted RBP19.93■□□□□ 0.78
DDX39A-207ENST00000588542 MPP5Q8N3R9 675 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 SERPINB12Q96P63 405 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 TRIM51Q9BSJ1 452 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 KIFC1Q9BW19 673 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 ZCCHC2Q9C0B9 1178 aaKnown RBP19.93■□□□□ 0.78
DDX39A-207ENST00000588542 DPEP2Q9H4A9 486 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 TREX1Q9NSU2 369 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 PADI4Q9UM07 663 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 KCNK6Q9Y257 313 aa19.93■□□□□ 0.78
DDX39A-207ENST00000588542 IGLV3-16A0A075B6K0 115 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 KMOO15229 486 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 SGTAO43765 313 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 EML2O95834 649 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 ZNF7P17097 686 aaPredicted RBP19.92■□□□□ 0.78
DDX39A-207ENST00000588542 NMBRP28336 390 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 RPIAP49247 311 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 ILKQ13418 452 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 GTF2H3Q13889 308 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 CCDC157Q569K6 752 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 SERPINA9Q86WD7 417 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 C17orf82Q86X59 251 aaPredicted RBP19.92■□□□□ 0.78
DDX39A-207ENST00000588542 IFI44Q8TCB0 444 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 ZDHHC1Q8WTX9 485 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 NAT14Q8WUY8 206 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 TTC25Q96NG3 672 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 TIMM29Q9BSF4 260 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 MRM3Q9HC36 420 aaKnown RBP19.92■□□□□ 0.78
DDX39A-207ENST00000588542 XAB2Q9HCS7 855 aaKnown RBP19.92■□□□□ 0.78
DDX39A-207ENST00000588542 CDC23Q9UJX2 597 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 SOX13Q9UN79 622 aa19.92■□□□□ 0.78
DDX39A-207ENST00000588542 AKAP13Q12802 2813 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 CPED1A4D0V7 1026 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 TRIM16O95361 564 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 GOT2P00505 430 aaKnown RBP19.91■□□□□ 0.78
DDX39A-207ENST00000588542 MSH3P20585 1137 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 ACRV1P26436 265 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 AKT1P31749 480 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 CLCNKAP51800 687 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 C2orf54Q08AI8 447 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 FOXC1Q12948 553 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 HLTFQ14527 1009 aaKnown RBP eCLIP19.91■□□□□ 0.78
DDX39A-207ENST00000588542 PLA2G4EQ3MJ16 856 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 C14orf28Q4W4Y0 310 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 PERM1Q5SV97 790 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 IZUMO3Q5VZ72 239 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 TMEM220Q6QAJ8 160 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 DHRS13Q6UX07 377 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 EFL1Q7Z2Z2 1120 aaKnown RBP19.91■□□□□ 0.78
DDX39A-207ENST00000588542 TRAPPC5Q8IUR0 188 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 NAGSQ8N159 534 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 AGGF1Q8N302 714 aaeCLIP19.91■□□□□ 0.78
DDX39A-207ENST00000588542 CHCHD4Q8N4Q1 142 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 PATE1Q8WXA2 126 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 SGF29Q96ES7 293 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 SGSM3Q96HU1 749 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 COPS8Q99627 209 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 KLC4Q9NSK0 619 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 EVA1BQ9NVM1 165 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 ZDHHC3Q9NYG2 299 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 TBC1D29Q9UFV1 150 aa19.91■□□□□ 0.78
DDX39A-207ENST00000588542 A6NCN8 305 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 OR2AG2A6NM03 316 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 URI1O94763 535 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-207ENST00000588542 GP1BAP07359 652 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 MRPS25P82663 173 aaKnown RBP19.9■□□□□ 0.78
DDX39A-207ENST00000588542 DBN1Q16643 649 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 INSCQ1MX18 579 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 AFTPHQ6ULP2 937 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 CES3Q6UWW8 571 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 DET1Q7L5Y6 550 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 TAS2R42Q7RTR8 314 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 PCGF5Q86SE9 256 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 HOOK3Q86VS8 718 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 OR4L1Q8NH43 312 aa19.9■□□□□ 0.78
DDX39A-207ENST00000588542 HYAL3O43820 417 aaPredicted RBP19.89■□□□□ 0.77
DDX39A-207ENST00000588542 TUBB4AP04350 444 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 MAZP56270 477 aaKnown RBP19.89■□□□□ 0.77
DDX39A-207ENST00000588542 PRAMEP78395 509 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 FNBP1LQ5T0N5 605 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 ARMC3Q5W041 872 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 BEND7Q8N7W2 519 aaPredicted RBP19.89■□□□□ 0.77
DDX39A-207ENST00000588542 OR6P1Q8NGX9 317 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 HEXDCQ8WVB3 486 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 ZNF592Q92610 1267 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 MFSD3Q96ES6 412 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 ZNF514Q96K75 400 aaPredicted RBP19.89■□□□□ 0.77
DDX39A-207ENST00000588542 SIGLEC10Q96LC7 697 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 TRIM56Q9BRZ2 755 aaKnown RBP19.89■□□□□ 0.77
DDX39A-207ENST00000588542 RABGEF1Q9UJ41 708 aa19.89■□□□□ 0.77
DDX39A-207ENST00000588542 DNMT3AQ9Y6K1 912 aaPredicted RBP19.89■□□□□ 0.77
DDX39A-207ENST00000588542 UNC13CQ8NB66 2214 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms