RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 OXCT1P55809 520 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 SH3BGRP55822 239 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-203ENST00000588210 MS4A2Q01362 244 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 POU4F1Q01851 419 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 CNGA3Q16281 694 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 GEN1Q17RS7 908 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 Q6ZS52 159 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 KIAA0408Q6ZU52 694 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 AHI1Q8N157 1196 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 SPEM1Q8N4L4 309 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 CCNYL1Q8N7R7 359 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 CEP70Q8NHQ1 597 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 WFDC5Q8TCV5 224 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 WFIKKN2Q8TEU8 576 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 NAT14Q8WUY8 206 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 FAR2Q96K12 515 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 MARK4Q96L34 752 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 RETREG1Q9H6L5 497 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 CATSPERBQ9H7T0 1116 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ABCB8Q9NUT2 735 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 KIAA1522Q9P206 1035 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ZDBF2Q9HCK1 2354 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-203ENST00000588210 TMEM233B4DJY2 109 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 TRIM38O00635 465 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ACOT8O14734 319 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 CFLARO15519 480 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 HLA-DQB2P05538 268 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 PMLP29590 882 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 PSMD8P48556 350 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 MTAPQ13126 283 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ZNF177Q13360 481 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-203ENST00000588210 GAS6Q14393 721 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 EIF4HQ15056 248 aaKnown RBP14.53□□□□□ -0.08
CCDC43-203ENST00000588210 TECRLQ5HYJ1 363 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ZNF470Q6ECI4 717 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-203ENST00000588210 CHSY3Q70JA7 882 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 SFTPA1Q8IWL2 248 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC43-203ENST00000588210 RPLP0P6Q8NHW5 317 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 HEXDCQ8WVB3 486 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 ZYG11BQ9C0D3 744 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 SLC39A8Q9C0K1 460 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 IGSF5Q9NSI5 407 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 SLC2A6Q9UGQ3 507 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 FBXO5Q9UKT4 447 aa14.53□□□□□ -0.08
CCDC43-203ENST00000588210 CRTAMO95727 393 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 PABPC1P11940 636 aaKnown RBP14.52□□□□□ -0.09
CCDC43-203ENST00000588210 HSPA13P48723 471 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 SEC13P55735 322 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 SULT2A1Q06520 285 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 C2orf27AQ580R0 203 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 ARTNQ5T4W7 220 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 AFMIDQ63HM1 303 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 CNSTQ6PJW8 725 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 CIR1Q86X95 450 aaPredicted RBP14.52□□□□□ -0.09
CCDC43-203ENST00000588210 C1orf210Q8IVY1 113 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 LILRA2Q8N149 483 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 CCDC126Q96EE4 140 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 LMLNQ96KR4 655 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 PRRX2Q99811 253 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 SPATA6Q9NWH7 488 aaPredicted RBP14.52□□□□□ -0.09
CCDC43-203ENST00000588210 SUCOQ9UBS9 1254 aaKnown RBP14.52□□□□□ -0.09
CCDC43-203ENST00000588210 ANKRD36A6QL64 1941 aa14.52□□□□□ -0.09
CCDC43-203ENST00000588210 CNTN5O94779 1100 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 CD70P32970 193 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 TIE1P35590 1138 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 CCR3P51677 355 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 SLC12A2P55011 1212 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 LMAN2Q12907 356 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 SQLEQ14534 574 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 DMC1Q14565 340 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 MAPRE2Q15555 327 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 ALFQ53S48 1182 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 RANBP10Q6VN20 620 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 TRMT11Q7Z4G4 463 aaKnown RBP14.51□□□□□ -0.09
CCDC43-203ENST00000588210 AFAP1L2Q8N4X5 818 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 ZNF513Q8N8E2 541 aaPredicted RBP14.51□□□□□ -0.09
CCDC43-203ENST00000588210 ACDQ96AP0 544 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 ASB9Q96DX5 294 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 MRGPRX2Q96LB1 330 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 KLHL32Q96NJ5 620 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 NPAS2Q99743 824 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 OMDQ99983 421 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 FSD1LQ9BXM9 530 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 COPS7BQ9H9Q2 264 aaPredicted RBP14.51□□□□□ -0.09
CCDC43-203ENST00000588210 MRPL40Q9NQ50 206 aaKnown RBP14.51□□□□□ -0.09
CCDC43-203ENST00000588210 ELOVL2Q9NXB9 296 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 AP4B1Q9Y6B7 739 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 STX16-NPEPL1H3BU86 382 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 NPC1O15118 1278 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 PTK2BQ14289 1009 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 TMEM215Q68D42 235 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 CXorf57Q6NSI4 855 aaKnown RBP14.51□□□□□ -0.09
CCDC43-203ENST00000588210 GK5Q6ZS86 529 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 ADIPOR2Q86V24 386 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 SATL1Q86VE3 508 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 SPATA6LQ8N4H0 392 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 PKP2Q99959 881 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms