RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 KIAA2013Q8IYS2 634 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 ELMOD2Q8IZ81 293 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 C2CD4AQ8NCU7 369 aaPredicted RBP9.58□□□□□ -0.88
LINC01539-201ENST00000587904 ADCY4Q8NFM4 1077 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 OR7D4Q8NG98 312 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 RFWD2Q8NHY2 731 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 SP7Q8TDD2 431 aaPredicted RBP9.58□□□□□ -0.88
LINC01539-201ENST00000587904 GLMNQ92990 594 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 C12orf43Q96C57 262 aaKnown RBP9.58□□□□□ -0.88
LINC01539-201ENST00000587904 ZNF778Q96MU6 729 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 TSNARE1Q96NA8 513 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 THTPAQ9BU02 230 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 EMILIN2Q9BXX0 1053 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 ZNF334Q9HCZ1 680 aaPredicted RBP9.58□□□□□ -0.88
LINC01539-201ENST00000587904 GKN1Q9NS71 199 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 SACM1LQ9NTJ5 587 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 THG1LQ9NWX6 298 aaKnown RBP9.58□□□□□ -0.88
LINC01539-201ENST00000587904 PRKAG2Q9UGJ0 569 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 APPL1Q9UKG1 709 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 TMCC3Q9ULS5 477 aa9.58□□□□□ -0.88
LINC01539-201ENST00000587904 A0A096LPK6 155 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 A0A0D9SEW6 157 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CAPN8A6NHC0 703 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CCDC85CA6NKD9 419 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ZNF839A8K0R7 811 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 GFRA2O00451 464 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 HOXC11O43248 304 aaPredicted RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SNAP91O60641 907 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SNNO75324 88 aaPredicted RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 H2AFYO75367 372 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SEC24DO94855 1032 aaPredicted RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 FGF19O95750 216 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 C1RP00736 705 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 PROCP04070 461 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 IRF1P10914 325 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 GRK2P25098 689 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ARNTP27540 789 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SLC7A9P82251 487 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ACVR1Q04771 509 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 FPGSQ05932 587 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CHI3L2Q15782 390 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 RALGPS1Q5JS13 557 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 IYDQ6PHW0 289 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 LILRA6Q6PI73 481 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SLC25A41Q8N5S1 370 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ANKRD53Q8N9V6 530 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 RDH11Q8TC12 318 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CEP19Q96LK0 163 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ALPK1Q96QP1 1244 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 C1orf50Q9BV19 199 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 OR2B2Q9GZK3 357 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ATXN3LQ9H3M9 355 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SUCOQ9UBS9 1254 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 TLK1Q9UKI8 766 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 EMCNQ9ULC0 261 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 RWDD3Q9Y3V2 267 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 PCDHGB3Q9Y5G1 929 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 PABPN1LA6NDY0 278 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 H0YJX3 145 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 JRKO75564 520 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 NDST3O95803 873 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 HOXB8P17481 243 aaPredicted RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 HDCP19113 662 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 GABRR2P28476 465 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 PTGS2P35354 604 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SLC1A2P43004 574 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CBX5P45973 191 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CLCN5P51795 746 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 KPNA2P52292 529 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 BST1Q10588 318 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CCNIQ14094 377 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 FASTKD1Q53R41 847 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 INO80DQ53TQ3 878 aaPredicted RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 RARS2Q5T160 578 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ZNF470Q6ECI4 717 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CXorf57Q6NSI4 855 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 TMC5Q6UXY8 1006 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 TMC8Q8IU68 726 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CPXM2Q8N436 756 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CARNMT1Q8N4J0 409 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 PYDC1Q8WXC3 89 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 TXNDC15Q96J42 360 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CNBD2Q96M20 576 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 RAD9AQ99638 391 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SPON2Q9BUD6 331 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 TMEM120AQ9BXJ8 343 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 MUC3BQ9H195 1237 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 MFSD1Q9H3U5 465 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 SERHL2Q9H4I8 314 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 ALG13Q9NP73 1137 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 C8orf4Q9NR00 106 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 DIABLOQ9NR28 239 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 TMEM9Q9P0T7 183 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 COPG2Q9UBF2 871 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 CNOT11Q9UKZ1 510 aaKnown RBP9.57□□□□□ -0.88
LINC01539-201ENST00000587904 PCDHGA8Q9Y5G5 932 aa9.57□□□□□ -0.88
LINC01539-201ENST00000587904 TRAV19A0A0A6YYK7 116 aa9.56□□□□□ -0.88
LINC01539-201ENST00000587904 CXorf51AA0A1B0GTR3 108 aa9.56□□□□□ -0.88
LINC01539-201ENST00000587904 MUSKO15146 869 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms