RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TEX15Q9BXT5 2789 aa13.84□□□□□ -0.19
DNMT1-213ENST00000587604 NBPF19A0A087WUL8 3843 aa13.84□□□□□ -0.19
DNMT1-213ENST00000587604 PDZK1P1A8MUH7 402 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 KCNK1O00180 336 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 VEGFDO43915 354 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 KATNA1O75449 491 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 RASSF9O75901 435 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 KIAA0754O94854 1291 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 PROSCO94903 275 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 FURINP09958 794 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 CCNYL3P0C7X3 344 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 FGF5P12034 268 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 GJC1P36383 396 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 LEPRP48357 1165 aaKnown RBP13.83□□□□□ -0.2
DNMT1-213ENST00000587604 CD97P48960 835 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 TAS2R40P59535 323 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 IFI35P80217 286 aaPredicted RBP13.83□□□□□ -0.2
DNMT1-213ENST00000587604 PPIDQ08752 370 aaKnown RBP13.83□□□□□ -0.2
DNMT1-213ENST00000587604 WASH2PQ6VEQ5 465 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 PRSS42Q7Z5A4 293 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 LRRTM4Q86VH4 590 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 CPNE8Q86YQ8 564 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 RBM12BQ8IXT5 1001 aaKnown RBP13.83□□□□□ -0.2
DNMT1-213ENST00000587604 TEX19Q8NA77 164 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 KLHL6Q8WZ60 621 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 ZDHHC12Q96GR4 267 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 ZNF830Q96NB3 372 aaPredicted RBP13.83□□□□□ -0.2
DNMT1-213ENST00000587604 TRIB3Q96RU7 358 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 SLC40A1Q9NP59 571 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 WASH6PQ9NQA3 447 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 EPHA6Q9UF33 1036 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 PADI1Q9ULC6 663 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 SHOC2Q9UQ13 582 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 DNAJC16Q9Y2G8 782 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 PCDHGA6Q9Y5G7 932 aa13.83□□□□□ -0.2
DNMT1-213ENST00000587604 UTP20O75691 2785 aaKnown RBP13.83□□□□□ -0.2
DNMT1-213ENST00000587604 SEC16AO15027 2179 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 MED13Q9UHV7 2174 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 K7EM74 188 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 MTSS1O43312 755 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 KIF1CO43896 1103 aaKnown RBP13.82□□□□□ -0.2
DNMT1-213ENST00000587604 SPAG6O75602 509 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 CREG1O75629 220 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 CDK14O94921 469 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 MT-ND3P03897 115 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 BRAFP15056 766 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 IDSP22304 550 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 KDELR1P24390 212 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 RPL10P27635 214 aaKnown RBP13.82□□□□□ -0.2
DNMT1-213ENST00000587604 CAPZBP47756 277 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 ZBED6P86452 979 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 ZBTB17Q13105 803 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 SEPT7Q16181 437 aaKnown RBP13.82□□□□□ -0.2
DNMT1-213ENST00000587604 PLA2G4EQ3MJ16 856 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
DNMT1-213ENST00000587604 AGAP9Q5VTM2 703 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 CACHD1Q5VU97 1274 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 CYB5D1Q6P9G0 228 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 NT5DC3Q86UY8 548 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 ATCAYQ86WG3 371 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 PPP1R3BQ86XI6 285 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 ZNF547Q8IVP9 402 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 RSC1A1Q92681 617 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 IMP4Q96G21 291 aaKnown RBP13.82□□□□□ -0.2
DNMT1-213ENST00000587604 ELMO2Q96JJ3 720 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 RNF157Q96PX1 679 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 PSMG3-AS1Q96PY0 264 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 RAB33BQ9H082 229 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 TMEM63CQ9P1W3 806 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 UVRAGQ9P2Y5 699 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 LCMT1Q9UIC8 334 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 PRRC2CQ9Y520 2896 aaKnown RBP13.82□□□□□ -0.2
DNMT1-213ENST00000587604 ESPL1Q14674 2120 aa13.82□□□□□ -0.2
DNMT1-213ENST00000587604 PIPSLA2A3N6 862 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 OR52A4PA6NMU1 304 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 MTX2O75431 263 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 RFPL1O75677 317 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 PIRTP0C851 137 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 BPIP17213 487 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 NELFEP18615 380 aaKnown RBP13.81□□□□□ -0.2
DNMT1-213ENST00000587604 NR1D1P20393 614 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 PBX1P40424 430 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 CDK18Q07002 472 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 GPR18Q14330 331 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 IQCB1Q15051 598 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 FAM92BQ6ZTR7 304 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 ASB18Q6ZVZ8 466 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 APLFQ8IW19 511 aaPredicted RBP13.81□□□□□ -0.2
DNMT1-213ENST00000587604 CPLX3Q8WVH0 158 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 RAPGEF5Q92565 580 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 CXorf40BQ96DE9 158 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 RNF31Q96EP0 1072 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 SRPK1Q96SB4 655 aaKnown RBP13.81□□□□□ -0.2
DNMT1-213ENST00000587604 GPR63Q9BZJ6 419 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 XPO4Q9C0E2 1151 aaKnown RBP13.81□□□□□ -0.2
DNMT1-213ENST00000587604 TWSG1Q9GZX9 223 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 LHX9Q9NQ69 397 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 CTTNBP2NLQ9P2B4 639 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 LNPEPQ9UIQ6 1025 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms