RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 CNGA3Q16281 694 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 TMEM52BQ4KMG9 183 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 WDR45BQ5MNZ6 344 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 SEL1L3Q68CR1 1132 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 LIPIQ6XZB0 460 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 CENPUQ71F23 418 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 DNASE2BQ8WZ79 361 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 SNX19Q92543 992 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 STAMBPL1Q96FJ0 436 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 CFAP36Q96G28 342 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 GPR174Q9BXC1 333 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 FRMD8Q9BZ67 464 aaPredicted RBP8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 IL22Q9GZX6 179 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 MIR1-1HGQ9H1L0 117 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 ZFYVE1Q9HBF4 777 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 SGK2Q9HBY8 427 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 MAGEE1Q9HCI5 957 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 BPIFA1Q9NP55 256 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 ZDHHC18Q9NUE0 388 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 CHMP2BQ9UQN3 213 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 PPIL1Q9Y3C6 166 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 TCAF1Q9Y4C2 921 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 PCDHGB2Q9Y5G2 931 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 ARL5AQ9Y689 179 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 SLCO1B1Q9Y6L6 691 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 DOPEY2Q9Y3R5 2298 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 TEX15Q9BXT5 2789 aa8.39□□□□□ -1.07
NEDD4L-218ENST00000587547 A0A1B0GVT2 93 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 HEATR9A2RTY3 570 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 IGLON5A6NGN9 336 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 C2orf81A6NN90 581 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 MEI4A8MW99 385 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CCL22O00626 93 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 STX7O15400 261 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 TSPAN6O43657 245 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 AP1G1O43747 822 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 PPFIA2O75334 1257 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 FSBPO95073 299 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CRTAMO95727 393 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 IGLV3-19P01714 112 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 NTRK1P04629 796 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 MYBL2P10244 700 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ZNF30P17039 623 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 LPOP22079 712 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ADRA1DP25100 572 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ECHS1P30084 290 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ETV3P41162 512 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ELK3P41970 407 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 MAGEA3P43357 314 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CSRP3P50461 194 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 STC1P52823 247 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 VSNL1P62760 191 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 MSLNQ13421 630 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 FASTKD3Q14CZ7 662 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 TAF1AQ15573 450 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CDKN3Q16667 212 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 PCID2Q5JVF3 399 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ALS2CLQ60I27 953 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 KIAA1161Q6NSJ0 714 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CES3Q6UWW8 571 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 RFLNAQ6ZTI6 216 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 HSD11B1LQ7Z5J1 315 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 TMPRSS12Q86WS5 348 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 HORMAD1Q86X24 394 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 IGDCC3Q8IVU1 814 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ZBED8Q8IZ13 594 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 AGGF1Q8N302 714 aaeCLIP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 TTC30BQ8N4P2 665 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 OR4K2Q8NGD2 314 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 OR13C4Q8NGS5 318 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 OR2T34Q8NGX1 318 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 BRSK1Q8TDC3 778 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 FAM131CQ96AQ9 280 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 ZNF669Q96BR6 464 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 WBP1Q96G27 269 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 DNAJC1Q96KC8 554 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 SIGLEC10Q96LC7 697 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 LYSMD1Q96S90 227 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 SRPK1Q96SB4 655 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 FMO2Q99518 471 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 MYOCQ99972 504 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 TRIM56Q9BRZ2 755 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 PARD6BQ9BYG5 372 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 FAM129AQ9BZQ8 928 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 TRABDQ9H4I3 376 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 C6orf106Q9H6K1 298 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CPNE5Q9HCH3 593 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 PREBQ9HCU5 417 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CHRAC1Q9NRG0 131 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 WSB2Q9NYS7 404 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 PKD2L2Q9NZM6 624 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 CD84Q9UIB8 345 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 PKP3Q9Y446 797 aa8.38□□□□□ -1.07
NEDD4L-218ENST00000587547 BCAT2O15382 392 aaPredicted RBP8.37□□□□□ -1.07
NEDD4L-218ENST00000587547 LDB2O43679 373 aa8.37□□□□□ -1.07
NEDD4L-218ENST00000587547 BRINP1O60477 761 aa8.37□□□□□ -1.07
NEDD4L-218ENST00000587547 CPNE3O75131 537 aaKnown RBP8.37□□□□□ -1.07
NEDD4L-218ENST00000587547 TNFRSF21O75509 655 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms