RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ACOX1Q15067 660 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ZNF284Q2VY69 593 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 GPRC6AQ5T6X5 926 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 HENMT1Q5T8I9 393 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 LSMEM2Q8N112 164 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 SKA1Q96BD8 255 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 P2RY13Q9BPV8 354 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 EBF4Q9BQW3 602 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ZSCAN5AQ9BUG6 496 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 WRAP53Q9BUR4 548 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 RIOK2Q9BVS4 552 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 CD207Q9UJ71 328 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 IKZF3Q9UKT9 509 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 STON1Q9Y6Q2 735 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 CCDC189A1A4V9 331 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 NPEPPSL1A6NEC2 478 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 H3BQ06 376 aaPredicted RBP19.62■□□□□ 0.73
TRIM47-204ENST00000587339 PSMD11O00231 422 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 HNRNPLP14866 589 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRIM47-204ENST00000587339 MPSTP25325 297 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 LIG3P49916 1009 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 HERVK_113P63132 956 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 B4GALNT1Q00973 533 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 TECPR1Q7Z6L1 1165 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 CLNKQ7Z7G1 428 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 TRAM1L1Q8N609 369 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 ZNF513Q8N8E2 541 aaPredicted RBP19.62■□□□□ 0.73
TRIM47-204ENST00000587339 LKAAEAR1Q8TD35 194 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 FUBP1Q96AE4 644 aaKnown RBP19.62■□□□□ 0.73
TRIM47-204ENST00000587339 ERLEC1Q96DZ1 483 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 L3HYPDHQ96EM0 354 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 PDLIM5Q96HC4 596 aaKnown RBP19.62■□□□□ 0.73
TRIM47-204ENST00000587339 ERVK-6Q9BXR3 956 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 SHCBP1LQ9BZQ2 653 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 SPATS2LQ9NUQ6 558 aaKnown RBP19.62■□□□□ 0.73
TRIM47-204ENST00000587339 HAO1Q9UJM8 370 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 TMPRSS11EQ9UL52 423 aa19.62■□□□□ 0.73
TRIM47-204ENST00000587339 SPTBN5Q9NRC6 3674 aaKnown RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 TMEM265A0A087WTH1 108 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 GFAPP14136 432 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 SCTRP47872 440 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 RGS4P49798 205 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 PFKFB4Q16877 469 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 ZNF678Q5SXM1 525 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 MAVSQ7Z434 540 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 RAB44Q7Z6P3 723 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 ALYREFQ86V81 257 aaKnown RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 PTGR2Q8N8N7 351 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 PANX3Q96QZ0 392 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 SUPT3HB4E1H0 165 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 PLK4O00444 970 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 NEMP1O14524 444 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 ZNF195O14628 629 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 WNT9AO14904 365 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 AREL1O15033 823 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 SPINT1O43278 529 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 SUPT3HO75486 399 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 SUPT7LO94864 414 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 AKT1P31749 480 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 WASP42768 502 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 PSMD8P48556 350 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 HK2P52789 917 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 E2F5Q15329 346 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 AAK1Q2M2I8 961 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 ERN2Q76MJ5 926 aaKnown RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 SUGP1Q8IWZ8 645 aaKnown RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 ZBTB2Q8N680 514 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 DCUN1D1Q96GG9 259 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 COG4Q9H9E3 785 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 EML4Q9HC35 981 aaKnown RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 DNAJC28Q9NX36 388 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 ZDHHC2Q9UIJ5 367 aa19.61■□□□□ 0.73
TRIM47-204ENST00000587339 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-204ENST00000587339 NPC1O15118 1278 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 OR56A5P0C7T3 313 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 DGKAP23743 735 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 TNFRSF4P43489 277 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 IDH3AP50213 366 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 ENPP2Q13822 863 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 SPDYAQ5MJ70 313 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 FAM46CQ5VWP2 391 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 FRMD7Q6ZUT3 714 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 RAVER1Q8IY67 606 aaKnown RBP19.6■□□□□ 0.73
TRIM47-204ENST00000587339 NRSN1Q8IZ57 195 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 AP2M1Q96CW1 435 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 TRMOQ9BU70 441 aa19.6■□□□□ 0.73
TRIM47-204ENST00000587339 APOBEC2Q9Y235 224 aaKnown RBP19.6■□□□□ 0.73
TRIM47-204ENST00000587339 FADS2P1A8MWK0 482 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 SLCO1B7G3V0H7 640 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 MATN2O00339 956 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 HDAC3O15379 428 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 MAGEC1O60732 1142 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 DIAPH2O60879 1101 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 ATP1B2P14415 290 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-204ENST00000587339 GALNT1Q10472 559 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-204ENST00000587339 TTLL9Q3SXZ7 439 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 VWA5B1Q5TIE3 1220 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 FBXO39Q8N4B4 442 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 COQ10AQ96MF6 247 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 CFAP99D6REC4 459 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms