RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RAD18Q9NS91 495 aa14.24□□□□□ -0.13
SDF2-202ENST00000585428 TMEM63CQ9P1W3 806 aa14.24□□□□□ -0.13
SDF2-202ENST00000585428 SEMA5BQ9P283 1151 aa14.24□□□□□ -0.13
SDF2-202ENST00000585428 NFKBIL1Q9UBC1 381 aaPredicted RBP14.24□□□□□ -0.13
SDF2-202ENST00000585428 TMPRSS11EQ9UL52 423 aa14.24□□□□□ -0.13
SDF2-202ENST00000585428 PADI1Q9ULC6 663 aa14.24□□□□□ -0.13
SDF2-202ENST00000585428 NENFQ9UMX5 172 aa14.24□□□□□ -0.13
SDF2-202ENST00000585428 MKRN2OSH3BPM6 223 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 MTSS1O43312 755 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 VEGFDO43915 354 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 SPAG6O75602 509 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 CREG1O75629 220 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 KIAA0754O94854 1291 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 PROSCO94903 275 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 NDUFA10O95299 355 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 NR1D1P20393 614 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 KDELR1P24390 212 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 NOP2P46087 812 aaKnown RBP14.23□□□□□ -0.13
SDF2-202ENST00000585428 ZBTB17Q13105 803 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 GALNT3Q14435 633 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 NFKBIBQ15653 356 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.23□□□□□ -0.13
SDF2-202ENST00000585428 FAM182AQ5T1J6 154 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 C11orf96Q7Z7L8 435 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 LRRTM4Q86VH4 590 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 LURAP1LQ8IV03 231 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 RAPGEF5Q92565 580 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 TIMM29Q9BSF4 260 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 KCND3Q9UK17 655 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 TLK1Q9UKI8 766 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 CAPN11Q9UMQ6 739 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 SHOC2Q9UQ13 582 aa14.23□□□□□ -0.13
SDF2-202ENST00000585428 KATNA1O75449 491 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 CDK14O94921 469 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 MBD3O95983 291 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 SERPINC1P01008 464 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 KRT7P08729 469 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 CCNYL3P0C7X3 344 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 PIRTP0C851 137 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 BPIP17213 487 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 NELFEP18615 380 aaKnown RBP14.22□□□□□ -0.13
SDF2-202ENST00000585428 RPL10P27635 214 aaKnown RBP14.22□□□□□ -0.13
SDF2-202ENST00000585428 ZBED6P86452 979 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 INSCQ1MX18 579 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 KHDC1Q4VXA5 237 aaKnown RBP14.22□□□□□ -0.13
SDF2-202ENST00000585428 ZNF569Q5MCW4 686 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 CACHD1Q5VU97 1274 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 ALS2CLQ60I27 953 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 CRTC3Q6UUV7 619 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 ASB18Q6ZVZ8 466 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 TMEM135Q86UB9 458 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 RASGRP3Q8IV61 690 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 APLFQ8IW19 511 aaPredicted RBP14.22□□□□□ -0.13
SDF2-202ENST00000585428 RBM12BQ8IXT5 1001 aaKnown RBP14.22□□□□□ -0.13
SDF2-202ENST00000585428 PLD5Q8N7P1 536 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 TEX19Q8NA77 164 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 RNF31Q96EP0 1072 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 ZDHHC12Q96GR4 267 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 ELMO2Q96JJ3 720 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 XPO4Q9C0E2 1151 aaKnown RBP14.22□□□□□ -0.13
SDF2-202ENST00000585428 POT1Q9NUX5 634 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 POLHQ9Y253 713 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 DNAJC16Q9Y2G8 782 aa14.22□□□□□ -0.13
SDF2-202ENST00000585428 PTPN13Q12923 2485 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 PIPSLA2A3N6 862 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 C3orf70A6NLC5 250 aaPredicted RBP14.21□□□□□ -0.13
SDF2-202ENST00000585428 OR52A4PA6NMU1 304 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 HAX1O00165 279 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 MTX2O75431 263 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 MTA2O94776 668 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 MT-ND3P03897 115 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 IDSP22304 550 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 GJC1P36383 396 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 CAPZBP47756 277 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 MLLT10P55197 1068 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 CDK18Q07002 472 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 TMEM115Q12893 351 aaPredicted RBP14.21□□□□□ -0.13
SDF2-202ENST00000585428 GPR18Q14330 331 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 NT5DC3Q86UY8 548 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 PPP1R3BQ86XI6 285 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 TRIM48Q8IWZ4 208 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 CPLX3Q8WVH0 158 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 RSC1A1Q92681 617 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 STAMBPL1Q96FJ0 436 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 SLC41A2Q96JW4 573 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 FCRL4Q96PJ5 515 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 VPS35Q96QK1 796 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 SLC25A51Q9H1U9 297 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 AKIRIN1Q9H9L7 192 aaPredicted RBP14.21□□□□□ -0.13
SDF2-202ENST00000585428 LHX9Q9NQ69 397 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 UVRAGQ9P2Y5 699 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 WDR37Q9Y2I8 494 aa14.21□□□□□ -0.13
SDF2-202ENST00000585428 PDZK1P1A8MUH7 402 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 ZNF487B1APH4 448 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 GOLGA6L22H0YM25 854 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 AURKAO14965 403 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 KCNJ13O60928 360 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 RASSF9O75901 435 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 TIAF1O95411 115 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms