RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 CCDC91Q7Z6B0 441 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 ADGRG6Q86SQ4 1221 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 SLC41A1Q8IVJ1 513 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 NELL1Q92832 810 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 FUBP1Q96AE4 644 aaKnown RBP15.95■□□□□ 0.14
SS18-226ENST00000585241 TSPAN17Q96FV3 270 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 DCUN1D1Q96GG9 259 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 ELMO2Q96JJ3 720 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 NDNQ99608 321 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 OLFM1Q99784 485 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 CCDC68Q9H2F9 335 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 SSU72Q9NP77 194 aaKnown RBP15.95■□□□□ 0.14
SS18-226ENST00000585241 PHPT1Q9NRX4 125 aaPredicted RBP15.95■□□□□ 0.14
SS18-226ENST00000585241 MKS1Q9NXB0 559 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 SLC39A10Q9ULF5 831 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 NOVA2Q9UNW9 492 aaKnown RBP15.95■□□□□ 0.14
SS18-226ENST00000585241 OAS3Q9Y6K5 1087 aaKnown RBP15.95■□□□□ 0.14
SS18-226ENST00000585241 GPR89AB7ZAQ6 455 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 FPGTO14772 594 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 NDUFS2O75306 463 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 FSBPO95073 299 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 MPOP05164 745 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 GPR89BP0CG08 455 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 MYCLP1P12525 358 aaPredicted RBP15.94■□□□□ 0.14
SS18-226ENST00000585241 STMN1P16949 149 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 CRABP2P29373 138 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 AKT1P31749 480 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 FNTBP49356 437 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 PRLHRP49683 370 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 CDKN2DP55273 166 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 PFN3P60673 137 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 RAB10P61026 200 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 TMEM115Q12893 351 aaPredicted RBP15.94■□□□□ 0.14
SS18-226ENST00000585241 BCL7AQ4VC05 210 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 TSSK4Q6SA08 328 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 KYAT3Q6YP21 454 aaKnown RBP15.94■□□□□ 0.14
SS18-226ENST00000585241 ABI3BPQ7Z7G0 1075 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 CMC1Q7Z7K0 106 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 LONP2Q86WA8 852 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 CEP97Q8IW35 865 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 SRRM1Q8IYB3 904 aaKnown RBP15.94■□□□□ 0.14
SS18-226ENST00000585241 GDAP1Q8TB36 358 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 FAM174AQ8TBP5 190 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 CABS1Q96KC9 395 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 BMFQ96LC9 184 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 APOOQ9BUR5 198 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 CAB39LQ9H9S4 337 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 FZD3Q9NPG1 666 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 LATS2Q9NRM7 1088 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 KLHL42Q9P2K6 505 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 PIKFYVEQ9Y2I7 2098 aa15.94■□□□□ 0.14
SS18-226ENST00000585241 POM121BA6NF01 834 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 FOXO6A8MYZ6 492 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 F8W8V4 182 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 CHUKO15111 745 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 LILRB5O75023 590 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 NIPSNAP2O75323 286 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 MTX2O75431 263 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 SLC35E2BP0CK96 405 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 BCKDHBP21953 392 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 TYK2P29597 1187 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 MAGOHP61326 146 aaKnown RBP15.93■□□□□ 0.14
SS18-226ENST00000585241 YPEL5P62699 121 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 PTRHD1Q6GMV3 140 aaKnown RBP15.93■□□□□ 0.14
SS18-226ENST00000585241 CLEC14AQ86T13 490 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 TRIM74Q86UV6 250 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 C11orf74Q86VG3 221 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 CLDN19Q8N6F1 224 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 RASGEF1AQ8N9B8 481 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 LKAAEAR1Q8TD35 194 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 FOXJ1Q92949 421 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 ALKBH8Q96BT7 664 aaKnown RBP15.93■□□□□ 0.14
SS18-226ENST00000585241 ZNF514Q96K75 400 aaPredicted RBP15.93■□□□□ 0.14
SS18-226ENST00000585241 PANX3Q96QZ0 392 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 LGR4Q9BXB1 951 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 DUSP15Q9H1R2 295 aaPredicted RBP15.93■□□□□ 0.14
SS18-226ENST00000585241 GPR27Q9NS67 375 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 TAS2R13Q9NYV9 303 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 ATXN10Q9UBB4 475 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 MUC3AQ02505 3323 aa15.93■□□□□ 0.14
SS18-226ENST00000585241 VPS26AO75436 327 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 RHOBTB1O94844 696 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 C2P06681 752 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 OR56A5P0C7T3 313 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 PYGBP11216 843 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 KRT4P19013 534 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 CD27P26842 260 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 AVPR2P30518 371 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 SLC26A3P40879 764 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 SKIV2L2P42285 1042 aaKnown RBP15.92■□□□□ 0.14
SS18-226ENST00000585241 CLCN7P51798 805 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 CTSCP53634 463 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 SLC12A2P55011 1212 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 RPL6Q02878 288 aaKnown RBP15.92■□□□□ 0.14
SS18-226ENST00000585241 PDE1CQ14123 709 aaPredicted RBP15.92■□□□□ 0.14
SS18-226ENST00000585241 NFATC4Q14934 902 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 ZNF528Q3MIS6 628 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 ZNF648Q5T619 568 aaPredicted RBP15.92■□□□□ 0.14
SS18-226ENST00000585241 KCTD16Q68DU8 428 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 KDM7AQ6ZMT4 941 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms