RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PTPRAP18433 802 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 CCNCP24863 283 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 ITGA3P26006 1051 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 ALDH3A2P51648 485 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 TMEM44Q2T9K0 475 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 PARP15Q460N3 678 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 C15orf52Q6ZUT6 534 aaKnown RBP12.95□□□□□ -0.34
RNF43-208ENST00000584437 MON1AQ86VX9 555 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 P2RX7Q99572 595 aaKnown RBP12.95□□□□□ -0.34
RNF43-208ENST00000584437 ADAM2Q99965 735 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 FEM1AQ9BSK4 669 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 SLC22A4Q9H015 551 aa12.95□□□□□ -0.34
RNF43-208ENST00000584437 AGO3Q9H9G7 860 aaKnown RBP12.95□□□□□ -0.34
RNF43-208ENST00000584437 KERAO60938 352 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 CCNB2O95067 398 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PTPN9P43378 593 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 MPP1Q00013 466 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 CXCL9Q07325 125 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 CLEC6AQ6EIG7 209 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 KLHDC10Q6PID8 442 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 GRIN3AQ8TCU5 1115 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 RSPH9Q9H1X1 276 aaPredicted RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 ST6GALNAC4Q9H4F1 302 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 CFL2Q9Y281 166 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TIMM22Q9Y584 194 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 CXCR6O00574 342 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 MAGEB3O15480 346 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TBX1O43435 398 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TBL1XO60907 577 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 KLRC2P26717 231 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 RTL4Q6ZR62 310 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TPGS1Q6ZTW0 290 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 IPPKQ9H8X2 491 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 ZNF214Q9UL59 606 aaPredicted RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 SPATA31C2B4DYI2 1134 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TEX46H3BTG2 121 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PAGE1O75459 146 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 UGT2B4P06133 528 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PTGS2P35354 604 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 CCNFP41002 786 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 RHBDL3P58872 404 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PRKD1Q15139 912 aaPredicted RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 NADK2Q4G0N4 442 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 FAM151BQ6UXP7 276 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 DENND1CQ8IV53 801 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 ZDHHC21Q8IVQ6 265 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 VANGL1Q8TAA9 524 aaPredicted RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 ZFAND2BQ8WV99 257 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 AP2M1Q96CW1 435 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TTLL2Q9BWV7 592 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 MIOSQ9NXC5 875 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 AASSQ9UDR5 926 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TBC1D24Q9ULP9 559 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 DIP2BQ9P265 1576 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 FOXO6A8MYZ6 492 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 GTPBP1O00178 669 aaKnown RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 CILPO75339 1184 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 NDST3O95803 873 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 MT-ND1P03886 318 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 RORCP51449 518 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TSC22D1Q15714 1073 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PAOXQ6QHF9 649 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 ASB9Q96DX5 294 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TECPR2O15040 1411 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 SPATA31A6Q5VVP1 1343 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 IQCMA0A1B0GVH7 501 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 H3BNH8 94 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PRODHO43272 600 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 COL6A1P12109 1028 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PITPNAQ00169 270 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNF43-208ENST00000584437 CXorf57Q6NSI4 855 aaKnown RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 SLITRK4Q8IW52 837 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 PHC3Q8NDX5 983 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 DQX1Q8TE96 717 aaKnown RBP12.94□□□□□ -0.34
RNF43-208ENST00000584437 CNPPD1Q9BV87 410 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 IL1RAPQ9NPH3 570 aa12.94□□□□□ -0.34
RNF43-208ENST00000584437 TRAV19A0A0A6YYK7 116 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 CHP2O43745 196 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 PGLSO95336 258 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 ITGB5P18084 799 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 CBX5P45973 191 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 MVKQ03426 396 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 ZBTB6Q15916 424 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 PPM1LQ5SGD2 360 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 DACT2Q5SW24 774 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 TMEM214Q6NUQ4 689 aaKnown RBP12.93□□□□□ -0.34
RNF43-208ENST00000584437 USP30Q70CQ3 517 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 BTN2A1Q7KYR7 527 aa12.93□□□□□ -0.34
RNF43-208ENST00000584437 DNAJB7Q7Z6W7 309 aaPredicted RBP12.93□□□□□ -0.34
RNF43-208ENST00000584437 ADAMTS15Q8TE58 950 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms