RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 NEMP1O14524 444 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 FCHO1O14526 889 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 KPNA5O15131 536 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 MAGEC1O60732 1142 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ATG13O75143 517 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ZNF821O75541 412 aaPredicted RBP9.2□□□□□ -0.94
SS18-220ENST00000582092 LEFTY1O75610 366 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 SUPT7LO94864 414 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 TRIM16O95361 564 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 APODP05090 189 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CISD3P0C7P0 127 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 OR56A5P0C7T3 313 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CD1DP15813 335 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 IMPDH1P20839 514 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CD9P21926 228 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 HOXD11P31277 338 aaPredicted RBP9.2□□□□□ -0.94
SS18-220ENST00000582092 AKT1P31749 480 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CTHP32929 405 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 NBL1P41271 181 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CDKN1CP49918 316 aaPredicted RBP9.2□□□□□ -0.94
SS18-220ENST00000582092 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
SS18-220ENST00000582092 CCR3P51677 355 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 MNAT1P51948 309 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 PGGT1BP53609 377 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ALDH18A1P54886 795 aaKnown RBP9.2□□□□□ -0.94
SS18-220ENST00000582092 ADARP55265 1226 aaKnown RBP9.2□□□□□ -0.94
SS18-220ENST00000582092 GRSF1Q12849 480 aaKnown RBP eCLIP9.2□□□□□ -0.94
SS18-220ENST00000582092 BNIP1Q12981 228 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 NFATC2Q13469 925 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 PEX6Q13608 980 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ACOX1Q15067 660 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CHRNA6Q15825 494 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ZNF284Q2VY69 593 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ZNF528Q3MIS6 628 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ZNF805Q5CZA5 627 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 SPDYAQ5MJ70 313 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ZNF549Q6P9A3 640 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 FBXL19Q6PCT2 694 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 SERPINA13PQ6UXR4 307 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 PIM3Q86V86 326 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 GPSM1Q86YR5 675 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 MYO1HQ8N1T3 1032 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 FBXO39Q8N4B4 442 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CHST14Q8NCH0 376 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 OR2A12Q8NGT7 310 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 RHEBL1Q8TAI7 183 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 RIN3Q8TB24 985 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 AGR3Q8TD06 166 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 SORCS1Q8WY21 1168 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 KCNJ9Q92806 393 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 RSPRY1Q96DX4 576 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ZFYVE19Q96K21 471 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 LYSMD1Q96S90 227 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 COPS8Q99627 209 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 FAM83CQ9BQN1 747 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 TRMOQ9BU70 441 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 DERL2Q9GZP9 239 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 CHRDQ9H2X0 955 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
SS18-220ENST00000582092 CD274Q9NZQ7 290 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 DLGAP2Q9P1A6 1054 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 PPIL1Q9Y3C6 166 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 MYOFQ9NZM1 2061 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 RALGAPA1Q6GYQ0 2036 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 RGSL1A5PLK6 1076 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 NPIPB15A6NHN6 443 aaPredicted RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 PROB1E7EW31 1015 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 C1QTNF3-AMACRE9PGA6 284 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 BTN3A1O00481 513 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 HDAC3O15379 428 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 ZBTB14O43829 449 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 OR1I1O60431 355 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 RNASEH1O60930 286 aaKnown RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 GPC4O75487 556 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 SERPINA6P08185 405 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 PRSS56P0CW18 603 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 CHRM1P11229 460 aaPredicted RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 ZNF37AP17032 561 aaPredicted RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 BPIP17213 487 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 UGT1A6P19224 532 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 MSH3P20585 1137 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 UGT1A1P22309 533 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 UGT1A4P22310 534 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 RPS3P23396 243 aaKnown RBP eCLIP9.19□□□□□ -0.94
SS18-220ENST00000582092 ACRV1P26436 265 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 UGT1A3P35503 534 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 UGT1A5P35504 534 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 NSG1P42857 185 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 SLC6A11P48066 632 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 CSRP3P50461 194 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 SUOXP51687 545 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 XIAPP98170 497 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 ELP6Q0PNE2 266 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 DLG1Q12959 904 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 PTPRRQ15256 657 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 GALNTL6Q49A17 601 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 FBXO43Q4G163 708 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 ARL13AQ5H913 290 aaPredicted RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 SH2D4BQ5SQS7 431 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 FAM46CQ5VWP2 391 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms