RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TMEM159Q96B96 161 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 TTC25Q96NG3 672 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 TBL1YQ9BQ87 522 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 TIMM29Q9BSF4 260 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 STN1Q9H668 368 aaKnown RBP19.23■□□□□ 0.67
SREBF1-220ENST00000581707 ARNT2Q9HBZ2 717 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 PRDM8Q9NQV8 689 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 LOXL2Q9Y4K0 774 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 BPTFQ12830 3046 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 PTPRQQ9UMZ3 2332 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 KIR2DS5A0A0G2JLQ3 304 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 A0A0G2JNG1 304 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 KIR2DS3K7RE56 304 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 AGRPO00253 132 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 GAPDHSO14556 408 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-220ENST00000581707 METTL18O95568 372 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 CRTAMO95727 393 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 CCDC175P0C221 793 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 JMJD7P0C870 316 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 HGFP14210 728 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 GDF10P55107 478 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 GPLD1P80108 840 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 NFATC2Q13469 925 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 KIR2DS5Q14953 304 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 RPS6KA1Q15418 735 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 LDLRAP1Q5SW96 308 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 DENND5AQ6IQ26 1287 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF574Q6ZN55 896 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF662Q6ZS27 426 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 CLEC14AQ86T13 490 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 SLC9B2Q86UD5 537 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 PDZD3Q86UT5 571 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 TRAPPC5Q8IUR0 188 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 SPACA3Q8IXA5 215 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 OR4K2Q8NGD2 314 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF398Q8TD17 642 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 SH3KBP1Q96B97 665 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 CMKLR1Q99788 373 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 DPYSL5Q9BPU6 564 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 ZCCHC2Q9C0B9 1178 aaKnown RBP19.22■□□□□ 0.67
SREBF1-220ENST00000581707 LZTFL1Q9NQ48 299 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 FEZ2Q9UHY8 353 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-220ENST00000581707 DNAJC16Q9Y2G8 782 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 KCTD3Q9Y597 815 aa19.22■□□□□ 0.67
SREBF1-220ENST00000581707 GPR39O43194 453 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 HOXB3P14651 431 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-220ENST00000581707 CA5AP35218 305 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 PDE1BQ01064 536 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 MSLNQ13421 630 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-220ENST00000581707 MEI1Q5TIA1 1274 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 KCTD11Q693B1 232 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 SLC13A5Q86YT5 568 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-220ENST00000581707 OR4D9Q8NGE8 314 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 OR10G6Q8NH81 332 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 KCNE4Q8WWG9 221 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 ATG4AQ8WYN0 398 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 CRELD1Q96HD1 420 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 AHCYL2Q96HN2 611 aaKnown RBP19.21■□□□□ 0.67
SREBF1-220ENST00000581707 ALS2CR12Q96Q35 445 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 FRMD8P1Q9BZ68 369 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-220ENST00000581707 AKAP7Q9P0M2 348 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-220ENST00000581707 CPNE7Q9UBL6 633 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 PISDQ9UG56 409 aa19.21■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF106Q9H2Y7 1883 aaKnown RBP19.2■□□□□ 0.66
SREBF1-220ENST00000581707 IGHV5-10-1A0A0J9YXX1 117 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 PRAMEF1O95521 474 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 VCLP18206 1134 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 STIP1P31948 543 aaKnown RBP19.2■□□□□ 0.66
SREBF1-220ENST00000581707 PPM1FP49593 454 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-220ENST00000581707 LIMK2P53671 638 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 CFHR1Q03591 330 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 TLE3Q04726 772 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 P3H1Q32P28 736 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 GPRC6AQ5T6X5 926 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 C11orf96Q7Z7L8 435 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 JAMLQ86YT9 394 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 RASGEF1AQ8N9B8 481 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 AVL9Q8NBF6 648 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 DDHD1Q8NEL9 900 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 CCDC97Q96F63 343 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-220ENST00000581707 DPH1Q9BZG8 443 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 LRRC40Q9H9A6 602 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 SMOXQ9NWM0 555 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 FKBPLQ9UIM3 349 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 PCDHGA7Q9Y5G6 932 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 IGSF10Q6WRI0 2623 aa19.2■□□□□ 0.66
SREBF1-220ENST00000581707 PRR19A6NJB7 356 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 PDZK1P1A8MUH7 402 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 PSMD3O43242 534 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 LIASO43766 372 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 DUX1O43812 170 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 NRDCO43847 1150 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 SRP72O76094 671 aaKnown RBP19.19■□□□□ 0.66
SREBF1-220ENST00000581707 XRCC1P18887 633 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-220ENST00000581707 ITIH1P19827 911 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 IDSP22304 550 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 SLC5A2P31639 672 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 CSF2RBP32927 897 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 CCZ1BP86790 482 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 CCZ1P86791 482 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms