RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 IKZF3Q9UKT9 509 aa10.41□□□□□ -0.74
SS18-217ENST00000580958 DNAJC16Q9Y2G8 782 aa10.41□□□□□ -0.74
SS18-217ENST00000580958 COQ6Q9Y2Z9 468 aa10.41□□□□□ -0.74
SS18-217ENST00000580958 NPEPPSL1A6NEC2 478 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 CCT8L1PA6NM43 557 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 A8MT66 165 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 PSMD11O00231 422 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 AREL1O15033 823 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 NPC1O15118 1278 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 SMIM24O75264 130 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 SLC25A14O95258 325 aaPredicted RBP10.4□□□□□ -0.74
SS18-217ENST00000580958 TRIM16O95361 564 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 HSPA4LO95757 839 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 KITP10721 976 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 NSG1P42857 185 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 KIR2DL1P43626 348 aaPredicted RBP10.4□□□□□ -0.74
SS18-217ENST00000580958 CCR10P46092 362 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 KCNC1P48547 511 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 ARFIP2P53365 341 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 DNAJB13P59910 316 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 ATP6V0D1P61421 351 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 B4GALNT1Q00973 533 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 ASPHQ12797 758 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 CNTN1Q12860 1018 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 E2F5Q15329 346 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 SKIV2LQ15477 1246 aaKnown RBP10.4□□□□□ -0.74
SS18-217ENST00000580958 ZNF284Q2VY69 593 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 TMEM52BQ4KMG9 183 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 HENMT1Q5T8I9 393 aaKnown RBP10.4□□□□□ -0.74
SS18-217ENST00000580958 FAM46CQ5VWP2 391 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 MACC1Q6ZN28 852 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 CACUL1Q86Y37 369 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 NRSN1Q8IZ57 195 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 TRAM1L1Q8N609 369 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 CLDN19Q8N6F1 224 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 PPP4R1Q8TF05 950 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 LINGO1Q96FE5 620 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 COQ10AQ96MF6 247 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 PLCD4Q9BRC7 762 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 TMEM120AQ9BXJ8 343 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 HDAC8Q9BY41 377 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 TFB2MQ9H5Q4 396 aaKnown RBP10.4□□□□□ -0.74
SS18-217ENST00000580958 KCNK12Q9HB15 430 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 CYP4F12Q9HCS2 524 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 ABCF3Q9NUQ8 709 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 SMOXQ9NWM0 555 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 TSR3Q9UJK0 312 aaKnown RBP10.4□□□□□ -0.74
SS18-217ENST00000580958 DHRS7Q9Y394 339 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 USH1CQ9Y6N9 552 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 PIAS3Q9Y6X2 628 aa10.4□□□□□ -0.74
SS18-217ENST00000580958 IGLV3-16A0A075B6K0 115 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 A0A0G2JND7 137 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 FADS2P1A8MWK0 482 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 H0Y858 1186 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 UBXN8O00124 270 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 CDC7O00311 574 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 NEMP1O14524 444 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 WNT9AO14904 365 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 MID1O15344 667 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 LZTS3O60299 673 aaPredicted RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 SYNCRIPO60506 623 aaKnown RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 MMP20O60882 483 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 TSPAN12O95859 305 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 ASGR2P07307 311 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 C6P13671 934 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 MPSTP25325 297 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 AKT1P31749 480 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 P2RY2P41231 377 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 SKIV2L2P42285 1042 aaKnown RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 NAGLUP54802 743 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 IL2P60568 153 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 SATB1Q01826 763 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 CAMK2GQ13555 558 aaPredicted RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 RCN2Q14257 317 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 TSNQ15631 228 aaKnown RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 CST6Q15828 149 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 C2orf27AQ580R0 203 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 ZNF648Q5T619 568 aaPredicted RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 PIP5KL1Q5T9C9 394 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 CCDC121Q6ZUS5 278 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 DET1Q7L5Y6 550 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 TRPM8Q7Z2W7 1104 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 RALGPS2Q86X27 583 aaPredicted RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 SLC44A3Q8N4M1 653 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 ZBTB2Q8N680 514 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 CCNYL1Q8N7R7 359 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 DTX3LQ8TDB6 740 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 EEF1AKMT1Q8WVE0 214 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 PPM1EQ8WY54 764 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 DNASE1L2Q92874 299 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 KIAA1191Q96A73 305 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 AP2M1Q96CW1 435 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 CCDC126Q96EE4 140 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 DTD2Q96FN9 168 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 TMEM237Q96Q45 408 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 ATOH8Q96SQ7 321 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 ZSCAN5AQ9BUG6 496 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 DRC3Q9H069 523 aa10.39□□□□□ -0.75
SS18-217ENST00000580958 RSPH9Q9H1X1 276 aaPredicted RBP10.39□□□□□ -0.75
SS18-217ENST00000580958 C8orf33Q9H7E9 229 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms