RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 RTP4Q96DX8 246 aa13.52□□□□□ -0.25
GGA3-208ENST00000579743 ZDHHC12Q96GR4 267 aa13.52□□□□□ -0.25
GGA3-208ENST00000579743 RBM41Q96IZ5 413 aaKnown RBP13.52□□□□□ -0.25
GGA3-208ENST00000579743 VPS35Q96QK1 796 aa13.52□□□□□ -0.25
GGA3-208ENST00000579743 FSD1LQ9BXM9 530 aa13.52□□□□□ -0.25
GGA3-208ENST00000579743 HACD1B0YJ81 288 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 RASSF9O75901 435 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 IPO7O95373 1038 aaKnown RBP13.51□□□□□ -0.25
GGA3-208ENST00000579743 MT-CYBP00156 380 aaPredicted RBP13.51□□□□□ -0.25
GGA3-208ENST00000579743 ANKRD34CP0C6C1 535 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 FAM87AP0C7U9 286 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 BPIP17213 487 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 PTPN3P26045 913 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 CETN2P41208 172 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 CDKN2BP42772 138 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 MAGEA1P43355 309 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 FOXM1Q08050 763 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 ABHD18Q0P651 414 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 SRSF6Q13247 344 aaKnown RBP13.51□□□□□ -0.25
GGA3-208ENST00000579743 ITGA9Q13797 1035 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 PRKD1Q15139 912 aaPredicted RBP13.51□□□□□ -0.25
GGA3-208ENST00000579743 PPP2R5EQ16537 467 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 MFSD7Q6UXD7 560 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 WASH2PQ6VEQ5 465 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 SPOCD1Q6ZMY3 1216 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 ESX1Q8N693 406 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 DTX3LQ8TDB6 740 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 TADA1Q96BN2 335 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 SLC45A3Q96JT2 553 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 CALR3Q96L12 384 aaKnown RBP13.51□□□□□ -0.25
GGA3-208ENST00000579743 SLC12A9Q9BXP2 914 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 SLC25A18Q9H1K4 315 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 CLMPQ9H6B4 373 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 WASH6PQ9NQA3 447 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 STARD5Q9NSY2 213 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 GEMIN8Q9NWZ8 242 aaKnown RBP13.51□□□□□ -0.25
GGA3-208ENST00000579743 UBP1Q9NZI7 540 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 PILRAQ9UKJ1 303 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 TRHDEQ9UKU6 1024 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 DNAJC16Q9Y2G8 782 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 PCDHB3Q9Y5E6 796 aa13.51□□□□□ -0.25
GGA3-208ENST00000579743 MN1Q10571 1320 aaPredicted RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 ZNF189O75820 626 aaPredicted RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 ANXA9O76027 345 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 STK17BO94768 372 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 STK10O94804 968 aaKnown RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 LIFP15018 202 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 HLA-DPA1P20036 260 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 CYLC1P35663 651 aaPredicted RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 SPAM1P38567 509 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 HADHBP55084 474 aaKnown RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 WNT3AP56704 352 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 UBE2IP63279 158 aaKnown RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 CYP4F2P78329 520 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 TMEM115Q12893 351 aaPredicted RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 MPP3Q13368 585 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 SEPT6Q14141 434 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 IL11RAQ14626 422 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 SEPT7Q16181 437 aaKnown RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 PLA2G4EQ3MJ16 856 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 AGAP9Q5VTM2 703 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 ABRAXAS1Q6UWZ7 409 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 GLT6D1Q7Z4J2 308 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 ZC3H18Q86VM9 953 aaKnown RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 CCDC170Q8IYT3 715 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 BMPERQ8N8U9 685 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 EID2BQ96D98 161 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 ZNF514Q96K75 400 aaPredicted RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 C9orf72Q96LT7 481 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 FCRL5Q96RD9 977 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 CTRCQ99895 268 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 TBC1D10AQ9BXI6 508 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 BPIFA1Q9NP55 256 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 TUBD1Q9UJT1 453 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 PCYT1BQ9Y5K3 369 aaPredicted RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 ADGRG1Q9Y653 693 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 ALG6Q9Y672 507 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
GGA3-208ENST00000579743 ZNF462Q96JM2 2506 aa13.5□□□□□ -0.25
GGA3-208ENST00000579743 GCN1Q92616 2671 aaKnown RBP13.49□□□□□ -0.25
GGA3-208ENST00000579743 LOC400499M0QZD8 3231 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 LOC285095A0A1B0GVY8 99 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 KLHL33A6NCF5 533 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 C2orf81A6NN90 581 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 WISP1O95388 367 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 ZIC2O95409 532 aaPredicted RBP13.49□□□□□ -0.25
GGA3-208ENST00000579743 C9P02748 559 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 TYRP1P17643 537 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 NFKB1P19838 968 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 CTNNA2P26232 953 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 RPL10P27635 214 aaKnown RBP13.49□□□□□ -0.25
GGA3-208ENST00000579743 GEMP55040 296 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 MAP7Q14244 749 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 PRPSAP1Q14558 356 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 ATP13A5Q4VNC0 1218 aa13.49□□□□□ -0.25
GGA3-208ENST00000579743 ZNF648Q5T619 568 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms