RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	LHX9	Q9NQ69	397 aa		9.47	□□□□□ -0.89
MSI2-208	ENST00000579466	LMBRD1	Q9NUN5	540 aa		9.47	□□□□□ -0.89
MSI2-208	ENST00000579466	KCND3	Q9UK17	655 aa		9.47	□□□□□ -0.89
MSI2-208	ENST00000579466	MYO6	Q9UM54	1294 aa		9.47	□□□□□ -0.89
MSI2-208	ENST00000579466	CENPE	Q02224	2701 aa		9.47	□□□□□ -0.89
MSI2-208	ENST00000579466	CREBBP	Q92793	2442 aa		9.46	□□□□□ -0.89
MSI2-208	ENST00000579466	LRRC10B	A6NIK2	292 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	ANKRD66	B4E2M5	251 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	KCNK1	O00180	336 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	DDX3Y	O15523	660 aa	Known RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	SEMA7A	O75326	666 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	JCHAIN	P01591	159 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	ZNF7	P17097	686 aa	Predicted RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	XRCC1	P18887	633 aa	Predicted RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	PGD	P52209	483 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	GBE1	Q04446	702 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	DPYSL3	Q14195	570 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	IFI16	Q16666	785 aa	Known RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	KHDC1	Q4VXA5	237 aa	Known RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	CRTC2	Q53ET0	693 aa	Predicted RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	PRR30	Q53SZ7	412 aa	Predicted RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	ALG1L	Q6GMV1	187 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	CAPRIN2	Q6IMN6	1127 aa	Known RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	RBM43	Q6ZSC3	357 aa	Known RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	ADGRG6	Q86SQ4	1221 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	LRRTM4	Q86VH4	590 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	TRAPPC5	Q8IUR0	188 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	AVL9	Q8NBF6	648 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	GDAP1	Q8TB36	358 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	MAML1	Q92585	1016 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	EID2B	Q96D98	161 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	LYSMD1	Q96S90	227 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	ZFYVE1	Q9HBF4	777 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	RTN4	Q9NQC3	1192 aa	Known RBP	9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	HAUS2	Q9NVX0	235 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	IP6K2	Q9UHH9	426 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	RARRES3	Q9UL19	164 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	PADI1	Q9ULC6	663 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	PSMD13	Q9UNM6	376 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	ZNF711	Q9Y462	761 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	ADGRG1	Q9Y653	693 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	HIVEP3	Q5T1R4	2406 aa		9.46	□□□□□ -0.9
MSI2-208	ENST00000579466	PRRC2C	Q9Y520	2896 aa	Known RBP	9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	MMP2	P08253	660 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	EBLN1	P0CF75	366 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	ATXN8OS	P0DMR3	200 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	SPTB	P11277	2137 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	FGF5	P12034	268 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	BRAF	P15056	766 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	FOLR1	P15328	257 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	CCNC	P24863	283 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	PBLD	P30039	288 aa	Predicted RBP	9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	PRKCI	P41743	596 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	ARL4D	P49703	201 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	CCL11	P51671	97 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	RPL26	P61254	145 aa	Known RBP	9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	ZBTB17	Q13105	803 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	SEMA5A	Q13591	1074 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	IL10RA	Q13651	578 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	IL11RA	Q14626	422 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	PAFAH1B3	Q15102	231 aa	Known RBP	9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	PLCL1	Q15111	1095 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	NFKBIB	Q15653	356 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	HADH	Q16836	314 aa	Known RBP	9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	PWWP2B	Q6NUJ5	590 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	B4GALNT4	Q76KP1	1039 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	PRSS42	Q7Z5A4	293 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	LRRC49	Q8IUZ0	686 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	SIDT2	Q8NBJ9	832 aa	Known RBP	9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	KCTD6	Q8NC69	237 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	GPR150	Q8NGU9	434 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	SSC4D	Q8WTU2	575 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	GLYATL1	Q969I3	302 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	SLC25A23	Q9BV35	468 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	MFRP	Q9BY79	579 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	GPR63	Q9BZJ6	419 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	ISCU	Q9H1K1	167 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	TRIM39	Q9HCM9	518 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	BPIFA1	Q9NP55	256 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	PDE7B	Q9NP56	450 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	CASS4	Q9NQ75	786 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	ACSS2	Q9NR19	701 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	POT1	Q9NUX5	634 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	AIPL1	Q9NZN9	384 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	FAM8A1	Q9UBU6	413 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	RPL26L1	Q9UNX3	145 aa	Known RBP	9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	WDR37	Q9Y2I8	494 aa		9.45	□□□□□ -0.9
MSI2-208	ENST00000579466	IGHV5-51	A0A0C4DH38	117 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	KMO	O15229	486 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	TOX3	O15405	576 aa	Predicted RBP	9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	GPR39	O43194	453 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	CDK14	O94921	469 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	MT-ND3	P03897	115 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	NELFE	P18615	380 aa	Known RBP	9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	IDS	P22304	550 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	CES1	P23141	567 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	COL8A1	P27658	744 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	HAL	P42357	657 aa		9.44	□□□□□ -0.9
MSI2-208	ENST00000579466	ARCN1	P48444	511 aa	Known RBP	9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms