RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 EID2BQ96D98 161 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 SNRNP40Q96DI7 357 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 ZDHHC12Q96GR4 267 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 CSPG4P5Q96PW8 444 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 TDRD1Q9BXT4 1180 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 POLR1EQ9GZS1 481 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 TRIM39Q9HCM9 518 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC40A1Q9NP59 571 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF451Q9Y4E5 1061 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 ABCA12Q86UK0 2595 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 DOPEY1Q5JWR5 2465 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 C1orf232A0A0U1RR37 186 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 DPM1O60762 260 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 MTX2O75431 263 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 CEACAM4O75871 244 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 TMEM63AO94886 807 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC25A14O95258 325 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 EBLN1P0CF75 366 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 RARAP10276 462 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 LPOP22079 712 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ELAVL4P26378 380 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ARL4AP40617 200 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 CAPZBP47756 277 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF135P52742 658 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 UBE2HP62256 183 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 NIPAL4Q0D2K0 466 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 RAPSNQ13702 412 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 DPYSL2Q16555 572 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 QPCTQ16769 361 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 INSCQ1MX18 579 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ANKRD20A8PQ5CZ79 823 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 PRAMEF17Q5VTA0 474 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ALS2CLQ60I27 953 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ABRAXAS1Q6UWZ7 409 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 IRF2BP2Q7Z5L9 587 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 RAVER1Q8IY67 606 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 TTC30BQ8N4P2 665 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 CISD2Q8N5K1 135 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SIDT2Q8NBJ9 832 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC38A9Q8NBW4 561 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ARRDC2Q8TBH0 407 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ADAMTS17Q8TE56 1095 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SEC14L1Q92503 715 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 MR1Q95460 341 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 PNPLA2Q96AD5 504 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF653Q96CK0 615 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC41A2Q96JW4 573 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 C5orf34Q96MH7 638 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 RANBP9Q96S59 729 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 LYSMD1Q96S90 227 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 MLPHQ9BV36 600 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SPATA16Q9BXB7 569 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC29A3Q9BZD2 475 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ASF1BQ9NVP2 202 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 RBM22Q9NW64 420 aaKnown RBP eCLIP9.93□□□□□ -0.827e-7■■□□□ 11.9
NPLOC4-220ENST00000576940 PKD2L2Q9NZM6 624 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 EPHA6Q9UF33 1036 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC5A6Q9Y289 635 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 WDR37Q9Y2I8 494 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 TTLL3Q9Y4R7 772 aa9.93□□□□□ -0.82
NPLOC4-220ENST00000576940 ANKRD66B4E2M5 251 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 CHUKO15111 745 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 DDX3YO15523 660 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 PRF1P14222 555 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF7P17097 686 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 HNRNPH3P31942 346 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 ITGA1P56199 1179 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 PDE1BQ01064 536 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 ACY1Q03154 408 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 GPS2Q13227 327 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 BOLA3Q53S33 107 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 CDKAL1Q5VV42 579 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF547Q8IVP9 402 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 RHOT1Q8IXI2 618 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 GPR26Q8NDV2 337 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 ENOX1Q8TC92 643 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 CCHCR1Q8TD31 782 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 FCRL4Q96PJ5 515 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 MAP3K3Q99759 626 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 SYT11Q9BT88 431 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 RAB33BQ9H082 229 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 CHST8Q9H2A9 424 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 CLSTN2Q9H4D0 955 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 FGF21Q9NSA1 209 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 IGSF5Q9NSI5 407 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 POT1Q9NUX5 634 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 FANCLQ9NW38 375 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 SEMA5BQ9P283 1151 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 PCDHGB7Q9Y5F8 929 aa9.92□□□□□ -0.82
NPLOC4-220ENST00000576940 RGSL1A5PLK6 1076 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 ANKUB1A6NFN9 424 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 F5H423 210 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 KMOO15229 486 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 MATN3O15232 486 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 SCRG1O75711 98 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 MTA2O94776 668 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 FTLP02792 175 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms