RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SMAD5Q99717 465 aaKnown RBP15.99■□□□□ 0.15
CTDNEP1-211ENST00000575783 SNRNP25Q9BV90 132 aaKnown RBP15.99■□□□□ 0.15
CTDNEP1-211ENST00000575783 ILKAPQ9H0C8 392 aaPredicted RBP15.99■□□□□ 0.15
CTDNEP1-211ENST00000575783 CARD9Q9H257 536 aa15.99■□□□□ 0.15
CTDNEP1-211ENST00000575783 FGF21Q9NSA1 209 aa15.99■□□□□ 0.15
CTDNEP1-211ENST00000575783 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
CTDNEP1-211ENST00000575783 SLC23A2Q9UGH3 650 aa15.99■□□□□ 0.15
CTDNEP1-211ENST00000575783 OR52A4PA6NMU1 304 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 CPNE3O75131 537 aaKnown RBP15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 SCRG1O75711 98 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 TACC2O95359 2948 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 RPL10P27635 214 aaKnown RBP15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 MMP13P45452 471 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 GLRBP48167 497 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 CLCNKAP51800 687 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 VAV2P52735 878 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 POLR2FP61218 127 aaKnown RBP15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 GPS2Q13227 327 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 INSCQ1MX18 579 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 RALGPS1Q5JS13 557 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 PPP1R15BQ5SWA1 713 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 IZUMO3Q5VZ72 239 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 MED25Q71SY5 747 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 BPHLQ86WA6 291 aaPredicted RBP15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 TMEM126BQ8IUX1 230 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 TMEM102Q8N9M5 508 aaPredicted RBP15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 GLIS1Q8NBF1 620 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 UBXN4Q92575 508 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 ZNF514Q96K75 400 aaPredicted RBP15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 PEBP4Q96S96 227 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 FAM83DQ9H4H8 585 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 RUBCNLQ9H714 662 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 SLC40A1Q9NP59 571 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 NT5MQ9NPB1 228 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 NLRC4Q9NPP4 1024 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 CWC15Q9P013 229 aaKnown RBP15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 TRIM10Q9UDY6 481 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 EPHA6Q9UF33 1036 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 ITGB1BP2Q9UKP3 347 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 HIVEP1P15822 2718 aa15.98■□□□□ 0.15
CTDNEP1-211ENST00000575783 PRSS44E7EML9 344 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 FZD6O60353 706 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 MAFKO60675 156 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 MTA2O94776 668 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 KLK3P07288 261 aaPredicted RBP15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 PSMA2P25787 234 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 PER3P56645 1201 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 SYCP1Q15431 976 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 ZRSR2Q15696 482 aaKnown RBP15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 ZXDCQ2QGD7 858 aaPredicted RBP15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 HGSNATQ68CP4 663 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 LCN10Q6JVE6 187 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 SLC38A9Q8NBW4 561 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 CXorf40BQ96DE9 158 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 GANQ9H2C0 597 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 POT1Q9NUX5 634 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 C5AR2Q9P296 337 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 TCFL5Q9UL49 500 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 OSGIN2Q9Y236 505 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 CHKBQ9Y259 395 aa15.97■□□□□ 0.15
CTDNEP1-211ENST00000575783 ZG16O60844 167 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 BRAFP15056 766 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 SPINT3P49223 89 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 KLK7P49862 253 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 DRG2P55039 364 aaKnown RBP15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 RRADP55042 308 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 ATP1A4Q13733 1029 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 DPYSQ14117 519 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 CAMK4Q16566 473 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 HENMT1Q5T8I9 393 aaKnown RBP15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 VWA5B1Q5TIE3 1220 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 LYPLAL1Q5VWZ2 237 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 ZBTB2Q8N680 514 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 SGSM3Q96HU1 749 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 MAP3K3Q99759 626 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 RAB33BQ9H082 229 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 ETNK2Q9NVF9 386 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 NTNG1Q9Y2I2 539 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 ADGRG1Q9Y653 693 aa15.96■□□□□ 0.15
CTDNEP1-211ENST00000575783 C1orf232A0A0U1RR37 186 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 PRPSAP2O60256 369 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 SLC25A14O95258 325 aaPredicted RBP15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 ZNF7P17097 686 aaPredicted RBP15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 AMPD1P23109 780 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 HCAR3P49019 387 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 JAM2P57087 298 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 GPR19Q15760 415 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 PRAMEF17Q5VTA0 474 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 ZNF517Q6ZMY9 492 aaPredicted RBP15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 RBM12BQ8IXT5 1001 aaKnown RBP15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 ATPAF2Q8N5M1 289 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 UBE2Q2Q8WVN8 375 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 NLNQ9BYT8 704 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 ZWILCHQ9H900 591 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 TRIM39Q9HCM9 518 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 KCND1Q9NSA2 647 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 SEMA5BQ9P283 1151 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 DNPEPQ9ULA0 475 aa15.95■□□□□ 0.14
CTDNEP1-211ENST00000575783 UBA6A0AVT1 1052 aaPredicted RBP15.94■□□□□ 0.14
CTDNEP1-211ENST00000575783 MEN1O00255 615 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms