RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CCDC78A2IDD5 438 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 TRABD2BA6NFA1 517 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 ERI2A8K979 691 aaKnown RBP13.08□□□□□ -0.31
RPAIN-216ENST00000575599 GPR89AB7ZAQ6 455 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 VEGFDO43915 354 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 SNX2O60749 519 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 CSO75390 466 aaKnown RBP13.08□□□□□ -0.31
RPAIN-216ENST00000575599 GPR89BP0CG08 455 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 CA5AP35218 305 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 GPRC6AQ5T6X5 926 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.31
RPAIN-216ENST00000575599 LINC00523Q86TU6 105 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 LRRTM4Q86VH4 590 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 TRAPPC5Q8IUR0 188 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 CCNJLQ8IV13 435 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 NAGSQ8N159 534 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 ARL14Q8N4G2 192 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 PRELID2Q8N945 189 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 DNAAF3Q8N9W5 541 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 MDM1Q8TC05 714 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 ZNF398Q8TD17 642 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 GRK7Q8WTQ7 553 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 DNAJC1Q96KC8 554 aaKnown RBP13.08□□□□□ -0.31
RPAIN-216ENST00000575599 TTC25Q96NG3 672 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 KRT12Q99456 494 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 MFRPQ9BY79 579 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 ZCCHC2Q9C0B9 1178 aaKnown RBP13.08□□□□□ -0.31
RPAIN-216ENST00000575599 ASB8Q9H765 288 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 KLC4Q9NSK0 619 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 DNAJC16Q9Y2G8 782 aa13.08□□□□□ -0.31
RPAIN-216ENST00000575599 TMEM8BA6NDV4 472 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 RHPN2P1A8MT19 583 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CHUKO15111 745 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 LDB2O43679 373 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 NUDT21O43809 227 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SRP72O76094 671 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 EML2O95834 649 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 GAS8O95995 478 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 APRTP07741 180 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 AKT1P31749 480 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 RPL22P35268 128 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 HADHAP40939 763 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 FNTAP49354 379 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CCL7P80098 99 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CDH17Q12864 832 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 TMEM115Q12893 351 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SEMA5AQ13591 1074 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 LDLRAP1Q5SW96 308 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 TEX35Q5T0J7 233 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 C8orf74Q6P047 294 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 DDHD1Q8NEL9 900 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 DTX3LQ8TDB6 740 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 UBXN4Q92575 508 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 NXPE2Q96DL1 559 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CCDC86Q9H6F5 360 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SMOXQ9NWM0 555 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 TBC1D29Q9UFV1 150 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CRLS1Q9UJA2 301 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 APPL1Q9UKG1 709 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 DRG1Q9Y295 367 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 TPRP12270 2363 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 ACACBO00763 2458 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 FRYQ5TBA9 3013 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 A0A1W2PQM1 296 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 EFCAB8A8MWE9 144 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 KMOO15229 486 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 TCEA3O75764 348 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SUN1O94901 812 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 MSH3P20585 1137 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 ITGALP20701 1170 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 MC4RP32245 332 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 COILP38432 576 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 GRIA1P42261 906 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 TERF1P54274 439 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 XIAPP98170 497 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CYP4F3Q08477 520 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 NFATC2Q13469 925 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 TRIP13Q15645 432 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SEPT7Q16181 437 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 ISXQ2M1V0 245 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 MICALCLQ6ZW33 695 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 DET1Q7L5Y6 550 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SPRED1Q7Z699 444 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 C17orf82Q86X59 251 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-216ENST00000575599 ZNF547Q8IVP9 402 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 CACTIN-AS1Q8N1I8 211 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 MMGT1Q8N4V1 131 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 RASGEF1AQ8N9B8 481 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 WDR48Q8TAF3 677 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SLC37A2Q8TED4 501 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 FAM96AQ9H5X1 160 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 SLC23A2Q9UGH3 650 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms