RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CETN2P41208 172 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 DUSP3P51452 185 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 CCL7P80098 99 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 E2F1Q01094 437 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 SEMA3AQ14563 771 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 KCNJ11Q14654 390 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 ST3GAL2Q16842 350 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 ANKRD22Q5VYY1 191 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 IYDQ6PHW0 289 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 CRTC3Q6UUV7 619 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 CCNJLQ8IV13 435 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 NXPE1Q8N323 547 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 LILRA3Q8N6C8 439 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 OR52K1Q8NGK4 314 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 GPR150Q8NGU9 434 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 MAPK15Q8TD08 544 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 ATXN7L3BQ96GX2 97 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 RANBP9Q96S59 729 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 OSBPL9Q96SU4 736 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 NUDT22Q9BRQ3 303 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 NRSN2Q9GZP1 204 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 TWSG1Q9GZX9 223 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 RAD18Q9NS91 495 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 KCND1Q9NSA2 647 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 NLE1Q9NVX2 485 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 TMEM9Q9P0T7 183 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 ZNF624Q9P2J8 865 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 SLC2A6Q9UGQ3 507 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 FEZ2Q9UHY8 353 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 ATXN7L1Q9ULK2 861 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 SNX12Q9UMY4 172 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 DRG1Q9Y295 367 aaKnown RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 WDR37Q9Y2I8 494 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 JRKLQ9Y4A0 524 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 URB1O60287 2271 aaKnown RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 IGHV1OR21-1A0A087WYE8 117 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 OR51F1A6NGY5 319 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 ERI2A8K979 691 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 CDRT15L2A8MXV6 281 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 CES2O00748 559 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 CEP104O60308 925 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 BRINP1O60477 761 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 STK10O94804 968 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 RPLP0P05388 317 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 F3P13726 295 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 ZNF7P17097 686 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 CD1CP29017 333 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 STIP1P31948 543 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 FDFT1P37268 417 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 MAGEA3P43357 314 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 PRLHRP49683 370 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 TMEM115Q12893 351 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 SQSTM1Q13501 440 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 POU6F1Q14863 301 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 C16orf72Q14CZ0 275 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 DBN1Q16643 649 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 BCL7AQ4VC05 210 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 CCDC38Q502W7 563 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 AGAP9Q5VTM2 703 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 ZDHHC20Q5W0Z9 365 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 RBM44Q6ZP01 1051 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 CHST15Q7LFX5 561 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 LRRTM4Q86VH4 590 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 ZNF761Q86XN6 746 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 BEND7Q8N7W2 519 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 SNIP1Q8TAD8 396 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 ACTRT1Q8TDG2 376 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 PMEPA1Q969W9 287 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 NXPE2Q96DL1 559 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 LINC00615Q96LM1 132 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 PPP1R2P1Q96PQ5 205 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 TRIM56Q9BRZ2 755 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 LRRN3Q9H3W5 708 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 DPEP2Q9H4A9 486 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 SARS2Q9NP81 518 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 PRDM8Q9NQV8 689 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 TREX1Q9NSU2 369 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 TRMT1Q9NXH9 659 aaKnown RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 PDP2Q9P2J9 529 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 LRIT1Q9P2V4 623 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 MOSPD1Q9UJG1 213 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 RIMKLBQ9ULI2 386 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
SMG6-216ENST00000575176 MN1Q10571 1320 aaPredicted RBP8.54□□□□□ -1.04
SMG6-216ENST00000575176 CCDC162PA2VCL2 907 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 STX7O15400 261 aaKnown RBP8.53□□□□□ -1.04
SMG6-216ENST00000575176 KRT37O76014 449 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 ASMTLO95671 621 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 IFNB1P01574 187 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 MPOP05164 745 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 THRAP10827 490 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
SMG6-216ENST00000575176 TPSB2P20231 275 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 ACRV1P26436 265 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 IVDP26440 423 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 MC4RP32245 332 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms