RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 LVRNQ6Q4G3 990 aa32.7■■■□□ 2.83
CTDNEP1-209ENST00000574205 ZNF669Q96BR6 464 aaPredicted RBP32.7■■■□□ 2.83
CTDNEP1-209ENST00000574205 LRRC39Q96DD0 335 aa32.7■■■□□ 2.83
CTDNEP1-209ENST00000574205 PWWP2AQ96N64 755 aa32.7■■■□□ 2.83
CTDNEP1-209ENST00000574205 TRIM56Q9BRZ2 755 aaKnown RBP32.7■■■□□ 2.83
CTDNEP1-209ENST00000574205 GSDMCQ9BYG8 508 aa32.7■■■□□ 2.83
CTDNEP1-209ENST00000574205 PRKAB1Q9Y478 270 aa32.7■■■□□ 2.83
CTDNEP1-209ENST00000574205 COL5A1P20908 1838 aaPredicted RBP32.7■■■□□ 2.82
CTDNEP1-209ENST00000574205 ZFC3H1O60293 1989 aaKnown RBP32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 PCNX2A6NKB5 2137 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 IGLV3-16A0A075B6K0 115 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 CBFA2T3O75081 653 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 VAPBO95292 243 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 CSRP1P21291 193 aaKnown RBP32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 CAV1Q03135 178 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 FASTKD1Q53R41 847 aaKnown RBP32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 CERS6Q6ZMG9 384 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 LRRTM4Q86VH4 590 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 RASGEF1AQ8N9B8 481 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 CCL4L1Q8NHW4 92 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 SEC14L1Q92503 715 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 DCUN1D1Q96GG9 259 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 CAMK1GQ96NX5 476 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 EBNA1BP2Q99848 306 aaKnown RBP32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 SLC32A1Q9H598 525 aa32.69■■■□□ 2.82
CTDNEP1-209ENST00000574205 CFAP99D6REC4 459 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 YY2O15391 372 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 ARNTP27540 789 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 CTBSQ01459 385 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 DEFB133Q30KQ1 61 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 LYPLAL1Q5VWZ2 237 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 CHST15Q7LFX5 561 aaPredicted RBP32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 TAF8Q7Z7C8 310 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 TRAPPC5Q8IUR0 188 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 SCG3Q8WXD2 468 aaKnown RBP32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 ART4Q93070 314 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 ZNF514Q96K75 400 aaPredicted RBP32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 TTC1Q99614 292 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 CATSPERZQ9NTU4 200 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 GPR34Q9UPC5 381 aa32.68■■■□□ 2.82
CTDNEP1-209ENST00000574205 KMOO15229 486 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 BANF1O75531 89 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 POLBP06746 335 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 PGAM1P18669 254 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 B4GALNT1Q00973 533 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 AARS2Q5JTZ9 985 aaKnown RBP32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 CRTC3Q6UUV7 619 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 CCNJLQ8IV13 435 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 ZNF547Q8IVP9 402 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 BAHD1Q8TBE0 780 aaPredicted RBP32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 FCRL3Q96P31 734 aaPredicted RBP32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 CNOT1A5YKK6 2376 aaKnown RBP32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 ZCWPW2A0A1B0GU75 182 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 TRIM38O00635 465 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 TTC4O95801 387 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 GUCY2DQ02846 1103 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 CBLBQ13191 982 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 ITIH4Q14624 930 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 DBN1Q16643 649 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 NRROSQ86YC3 692 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 DEFB124Q8NES8 71 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 ST14Q9Y5Y6 855 aa32.67■■■□□ 2.82
CTDNEP1-209ENST00000574205 GOLGA4Q13439 2230 aaKnown RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 SPTBN4Q9H254 2564 aa32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 ARHGEF17Q96PE2 2063 aaPredicted RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 CD3EAPO15446 510 aaKnown RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 ATP1B2P14415 290 aaPredicted RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 AK4P27144 223 aaPredicted RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 PPARGP37231 505 aaPredicted RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 ARCN1P48444 511 aaKnown RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 PLTPP55058 493 aa32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 TRADDQ15628 312 aa32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 CDC6Q99741 560 aa32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 DMGDHQ9UI17 866 aaKnown RBP32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 TEX264Q9Y6I9 313 aa32.66■■■□□ 2.82
CTDNEP1-209ENST00000574205 ESYT3A0FGR9 886 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 OR2AG2A6NM03 316 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 E7ESA3 106 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 SIGLEC6O43699 453 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 ACP5P13686 325 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 CTSCP53634 463 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 C6orf132Q5T0Z8 1188 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 ZCCHC8Q6NZY4 707 aaKnown RBP32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 CENPUQ71F23 418 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 FBXO25Q8TCJ0 367 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 SGF29Q96ES7 293 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 BOCQ9BWV1 1114 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 FTSJ1Q9UET6 329 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 PLEKHM1Q9Y4G2 1056 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 FAM169AQ9Y6X4 670 aa32.65■■■□□ 2.82
CTDNEP1-209ENST00000574205 BHMG1C9JSJ3 638 aaPredicted RBP32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 ELK3P41970 407 aa32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 NSG1P42857 185 aa32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 PDIA2Q13087 525 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 PUM1Q14671 1186 aaKnown RBP eCLIP32.64■■■□□ 2.826e-18■■□□□ 12.7
CTDNEP1-209ENST00000574205 TMEM220Q6QAJ8 160 aa32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 PACS1Q6VY07 963 aa32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 DET1Q7L5Y6 550 aa32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 FAM181AQ8N9Y4 354 aa32.64■■■□□ 2.82
CTDNEP1-209ENST00000574205 CCDC97Q96F63 343 aaPredicted RBP32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms