RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TLX3O43711 291 aaPredicted RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 NUDT21O43809 227 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A9O60656 530 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 PRAMEF1O95521 474 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 ECEL1O95672 775 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 MT-CO3P00414 261 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 FGGP02679 453 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 GOLGA6DP0CG33 693 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 CDK4P11802 303 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A6P19224 532 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A1P22309 533 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A4P22310 534 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 RPL22P35268 128 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A3P35503 534 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A5P35504 534 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 SPAM1P38567 509 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 FASLGP48023 281 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 ARSDP51689 593 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 CLCNKAP51800 687 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UBE2IP63279 158 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 DAB2P98082 770 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 ACVR1Q04771 509 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 LRP8Q14114 963 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 CCNG2Q16589 344 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 ISXQ2M1V0 245 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 CCDC181Q5TID7 509 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 SLC30A9Q6PML9 568 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 FAM151BQ6UXP7 276 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 FAM83HQ6ZRV2 1179 aaPredicted RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 MARK2Q7KZI7 788 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 PHYKPLQ8IUZ5 450 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 PIANPQ8IYJ0 282 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
SMG6-210ENST00000572205 PAF1Q8N7H5 531 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 RASGEF1AQ8N9B8 481 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 OR4K2Q8NGD2 314 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 CCHCR1Q8TD31 782 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 BRSK1Q8TDC3 778 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 SLC37A2Q8TED4 501 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 NAT6Q93015 286 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 MS4A14Q96JA4 679 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 DNAJC1Q96KC8 554 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 ZNF778Q96MU6 729 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 ALS2CR12Q96Q35 445 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 SRPK1Q96SB4 655 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 SPATA16Q9BXB7 569 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 FSD1LQ9BXM9 530 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 GPR63Q9BZJ6 419 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 OR2AG1Q9H205 316 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A7Q9HAW7 530 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A10Q9HAW8 530 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 UGT1A8Q9HAW9 530 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 ETNK1Q9HBU6 452 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 CASS4Q9NQ75 786 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 GOLGA6AQ9NYA3 693 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 NCKIPSDQ9NZQ3 722 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 TSR3Q9UJK0 312 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 DCTN4Q9UJW0 460 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 PADI4Q9UM07 663 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 CLCA2Q9UQC9 943 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 ZKSCAN5Q9Y2L8 839 aa8.57□□□□□ -1.04
SMG6-210ENST00000572205 AAR2Q9Y312 384 aaKnown RBP8.57□□□□□ -1.04
SMG6-210ENST00000572205 GLYATL1P3A0A0U1RQE8 302 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 TCRBV7S3A2A0A539 114 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 CPED1A4D0V7 1026 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 TMEM8BA6NDV4 472 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 GOLGA6L9A6NEM1 432 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 TRABD2BA6NFA1 517 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 GPR89AB7ZAQ6 455 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 PDE2AO00408 941 aaPredicted RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 B4GAT1O43505 415 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 CSO75390 466 aaKnown RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 TCEA3O75764 348 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ZNF189O75820 626 aaPredicted RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 TMEM63AO94886 807 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 GPR89BP0CG08 455 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ACP5P13686 325 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 CTSEP14091 401 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 PNLIPP16233 465 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 GLB1P16278 677 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 FOXN2P32314 431 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ACTR1BP42025 376 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 MAGEA6P43360 314 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 KCNJ1P48048 391 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 CDKN1CP49918 316 aaPredicted RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 ACTR1AP61163 376 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ZFP36L1Q07352 338 aaKnown RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 DMPKQ09013 629 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ILF3Q12906 894 aaKnown RBP eCLIP8.56□□□□□ -1.047e-7■■■■□ 23.2
SMG6-210ENST00000572205 NFATC2Q13469 925 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 SNX1Q13596 522 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 CCDC157Q569K6 752 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 GPRC6AQ5T6X5 926 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ZNF574Q6ZN55 896 aaPredicted RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 ARHGEF18Q6ZSZ5 1173 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 TAF8Q7Z7C8 310 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 GALNT13Q8IUC8 556 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ARL14Q8N4G2 192 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms