RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 SEMA3AQ14563 771 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 NR0B2Q15466 257 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SMAD1Q15797 465 aaKnown RBP8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 GPR33Q49SQ1 333 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 ZRANB3Q5FWF4 1079 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 LDLRAP1Q5SW96 308 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 RNASEH2BQ5TBB1 312 aaKnown RBP8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 IYDQ6PHW0 289 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 CRTC3Q6UUV7 619 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 CES3Q6UWW8 571 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 XKR5Q6UX68 686 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 TMPRSS7Q7RTY8 843 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 EFL1Q7Z2Z2 1120 aaKnown RBP8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 LRRTM4Q86VH4 590 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SERPINA9Q86WD7 417 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 NXPE1Q8N323 547 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 ARL14Q8N4G2 192 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 BEND7Q8N7W2 519 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 KYQ8NBH2 561 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 IFI44Q8TCB0 444 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 ZDHHC1Q8WTX9 485 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 MFSD3Q96ES6 412 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SGSM3Q96HU1 749 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SIGLEC10Q96LC7 697 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 C16orf45Q96MC5 204 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SERPINB12Q96P63 405 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 KRT12Q99456 494 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 TRIM56Q9BRZ2 755 aaKnown RBP8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 KIFC1Q9BW19 673 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SCNM1Q9BWG6 230 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 IL22Q9GZX6 179 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 PRDM8Q9NQV8 689 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 KLC4Q9NSK0 619 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SYBUQ9NX95 663 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 BFARQ9NZS9 450 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SCHIP1Q9P0W5 487 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 TBC1D29Q9UFV1 150 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 CRLS1Q9UJA2 301 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 KLK13Q9UKR3 277 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 SLC30A1Q9Y6M5 507 aa8.57□□□□□ -1.04
TRAPPC1-203ENST00000571739 WDR87Q6ZQQ6 2873 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 KNTC1P50748 2209 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 SPTBN4Q9H254 2564 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 PTPRBP23467 1997 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 A0A1W2PQM1 296 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 FAM149AA5PLN7 773 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 B4DGG1 531 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 AP3B1O00203 1094 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 DNALI1O14645 258 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 KMOO15229 486 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 PPM1DO15297 605 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 OPA1O60313 960 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 TRIM16O95361 564 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 GP1BAP07359 652 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 MLNP12872 115 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 ATP1B2P14415 290 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 BRAFP15056 766 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 GLB1P16278 677 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 MSH3P20585 1137 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 ITGALP20701 1170 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 ACRV1P26436 265 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 ARNTP27540 789 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 RPIAP49247 311 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 SHC2P98077 582 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 E2F1Q01094 437 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 DR1Q01658 176 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 CACNG1Q06432 222 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 LAMB3Q13751 1172 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 PPP1R7Q15435 360 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 PLA2G4EQ3MJ16 856 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 C14orf28Q4W4Y0 310 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 FNBP1LQ5T0N5 605 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 CDCP2Q5VXM1 449 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 FAM83HQ6ZRV2 1179 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 DET1Q7L5Y6 550 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 NLRP9Q7RTR0 991 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 TAS2R42Q7RTR8 314 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 LDB1Q86U70 411 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 JAMLQ86YT9 394 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 PPIL6Q8IXY8 311 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 SFRP1Q8N474 314 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 OR4L1Q8NH43 312 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 PEX13Q92968 403 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 GLMNQ92990 594 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 TTC25Q96NG3 672 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 TRIM51Q9BSJ1 452 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 NCKIPSDQ9NZQ3 722 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 ZNF624Q9P2J8 865 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 LRIT1Q9P2V4 623 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 SOX13Q9UN79 622 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 DNAJC16Q9Y2G8 782 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 WDR37Q9Y2I8 494 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 DNMT3AQ9Y6K1 912 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 PRSS21Q9Y6M0 314 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 RNF215Q9Y6U7 377 aa8.56□□□□□ -1.04
TRAPPC1-203ENST00000571739 ZNF106Q9H2Y7 1883 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-203ENST00000571739 ZFC3H1O60293 1989 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-203ENST00000571739 PRAMEF33A0A0G2JMD5 474 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms