RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 GPR152Q8TDT2 470 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 FUBP1Q96AE4 644 aaKnown RBP17.3■□□□□ 0.36
SCARF1-205ENST00000571272 CDKN2AIPNLQ96HQ2 116 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 SMIM14Q96QK8 99 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 CCDC68Q9H2F9 335 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 ZNF639Q9UID6 485 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 BCL10O95999 233 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 CHEK2O96017 543 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 FUCA1P04066 466 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 RPS17P08708 135 aaKnown RBP17.3■□□□□ 0.36
SCARF1-205ENST00000571272 MBL2P11226 248 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-205ENST00000571272 CDKN1CP49918 316 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-205ENST00000571272 ACVR1Q04771 509 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 PIGFQ07326 219 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 LDLRAP1Q5SW96 308 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 ZNF683Q8IZ20 524 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 THEM5Q8N1Q8 247 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 SFRP1Q8N474 314 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 DTWD1Q8N5C7 304 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 ZBTB8BQ8NAP8 495 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-205ENST00000571272 TSPEARQ8WU66 669 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 RSPH1Q8WYR4 309 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 LHPPQ9H008 270 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 SYTL2Q9HCH5 934 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 TMEM248Q9NWD8 314 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 TAS2R13Q9NYV9 303 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 GIT1Q9Y2X7 761 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 OR4F21O95013 312 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 ESRRBO95718 433 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 CPNE6O95741 557 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 NFKBIAP25963 317 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 HTR1EP28566 365 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 EMX2Q04743 252 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 RAD51Q06609 339 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 NR1D2Q14995 579 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 SLC39A12Q504Y0 691 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 C6orf136Q5SQH8 315 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 GRAMD4Q6IC98 578 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 TEX26Q8N6G2 289 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 GPR150Q8NGU9 434 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 BRSK1Q8TDC3 778 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 BPIFB1Q8TDL5 484 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 LRRC3Q9BY71 257 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 TSR3Q9UJK0 312 aaKnown RBP17.3■□□□□ 0.36
SCARF1-205ENST00000571272 TLR6Q9Y2C9 796 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 FUOMA2VDF0 154 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 UPK1AO00322 258 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 RAMP2O60895 175 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 UROSP10746 265 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 CPT1AP50416 773 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 MLLT10P55197 1068 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 GRSF1Q12849 480 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 CCL14Q16627 93 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 IMPG1Q17R60 797 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 SPATS1Q496A3 300 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 R3HCC1LQ7Z5L2 792 aaKnown RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 SLC39A13Q96H72 371 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 YTHDF1Q9BYJ9 559 aaKnown RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 DERL2Q9GZP9 239 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 POLR1EQ9GZS1 481 aaKnown RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 TMEM165Q9HC07 324 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 TRIM64BA6NI03 449 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 H0YAE9 185 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 CYP11A1P05108 521 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 ENO2P09104 434 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 DGKQP52824 942 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 ERVK-8P63133 956 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 NRG1Q02297 640 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 RELAQ04206 551 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 PPP1R8Q12972 351 aaKnown RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 ZNF235Q14590 738 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 XKR7Q5GH72 579 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 BROXQ5VW32 411 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 XAF1Q6GPH4 301 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 PROSER1Q86XN7 944 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 HID1Q8IV36 788 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 RIMKLAQ8IXN7 391 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 OR52B6Q8NGF0 335 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 ITFG1Q8TB96 612 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 RPRD1AQ96P16 312 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 CYP2S1Q96SQ9 504 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 CSF3RQ99062 836 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 TUBA1CQ9BQE3 449 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 BRINP2Q9C0B6 783 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 AP5M1Q9H0R1 490 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 PFDN4Q9NQP4 134 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 TMEM9Q9P0T7 183 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 EIF2B4Q9UI10 523 aaKnown RBP17.29■□□□□ 0.36
SCARF1-205ENST00000571272 PCTPQ9UKL6 214 aa17.29■□□□□ 0.36
SCARF1-205ENST00000571272 COL4A4P53420 1690 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 DOCK4Q8N1I0 1966 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 TYW5A2RUC4 315 aaKnown RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 LCHNA4D1U4 455 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 FGF1P05230 155 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 ZNF865P0CJ78 1059 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms