RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CHMP2BQ9UQN3 213 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ZNF510Q9Y2H8 683 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 COQ6Q9Y2Z9 468 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 COPG1Q9Y678 874 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 KCNMB2Q9Y691 235 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 STYXL1Q9Y6J8 313 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 U3KQV3 271 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 MYOFQ9NZM1 2061 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 HELZP42694 1942 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 COL1A2P08123 1366 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 NCANO14594 1321 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FAM230AA0A1W2PPH8 454 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 GRID2IPA4D2P6 1211 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CCDC154A6NI56 674 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZNF233A6NK53 670 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 OR6C75A6NL08 312 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TMEM210A6NLX4 147 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SRRM3A6NNA2 597 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZNF716A6NP11 495 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 GOLGA8TH3BQL2 631 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 GOLGA8RI6L899 631 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ERVH48-1M5A8F1 160 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 MYO1FO00160 1098 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ARVCFO00192 962 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 HAS3O00219 553 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLC33A1O00400 549 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 SOCS6O14544 535 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 DNALI1O14645 258 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 MSTNO14793 375 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CLDN3O15551 220 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 LILRB5O75023 590 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 N4BP1O75113 896 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 TADA2AO75478 443 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CRCPO75575 148 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ACTL6BO94805 426 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 HEXIM1O94992 359 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 MFN2O95140 757 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 LGI1O95970 557 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ADH1BP00325 375 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PGK1P00558 417 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TGFAP01135 160 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FTLP02792 175 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 KRT6BP04259 564 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PCCBP05166 539 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ANXA2P07355 339 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 NFICP08651 508 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZNF735P0CB33 412 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SRCP12931 536 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CYBAP13498 195 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 MTHFD2P13995 350 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 EZRP15311 586 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 ELNP15502 786 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TNNI1P19237 187 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 NME2P22392 152 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PROZP22891 400 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 AHCYP23526 432 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PTPN4P29074 926 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 EPHA8P29322 1005 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 CXCR5P32302 372 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TRHRP34981 398 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 BSGP35613 385 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PRKCIP41743 596 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CDKN1BP46527 198 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 RAP1GAPP47736 663 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 GRIA4P48058 902 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KRT6CP48668 564 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ALDH7A1P49419 539 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 HARS2P49590 506 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 FLT3LGP49771 235 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KHKP50053 298 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 DNA2P51530 1060 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 MAP2K6P52564 334 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLC5A3P53794 718 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 NAGLUP54802 743 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 GALCP54803 685 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KIAA1024LP59773 190 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 RAB14P61106 215 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ACTR3P61158 418 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SNRPFP62306 86 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 EEF1A1P68104 462 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 MRPS25P82663 173 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 LACTBP83111 547 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 TNFRSF17Q02223 184 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 EEF1A2Q05639 463 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 CKAP4Q07065 602 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 C2orf54Q08AI8 447 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SF3A3Q12874 501 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMG6-208ENST00000570874 OVGP1Q12889 678 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 DCTN2Q13561 401 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 SPA17Q15506 151 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLC18A3Q16572 532 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 MAPK6Q16659 721 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PRSS53Q2L4Q9 553 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FAM83EQ2M2I3 478 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KIZQ2M2Z5 673 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SMTNL2Q2TAL5 461 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZNF568Q3ZCX4 644 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FASTKD1Q53R41 847 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 C2CD6Q53TS8 623 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms