RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 KIR2DS3K7RE56 304 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 SNX2O60749 519 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 SRP72O76094 671 aaKnown RBP12.84□□□□□ -0.35
CNOT1-220ENST00000569916 CPNE6O95741 557 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 SLC2A4P14672 509 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 CD1CP29017 333 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 CSF2RBP32927 897 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 EIF2S3P41091 472 aaKnown RBP12.84□□□□□ -0.35
CNOT1-220ENST00000569916 CTSCP53634 463 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 ERVPABLB-1P60509 514 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 XIAPP98170 497 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 PDE1BQ01064 536 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 HHEXQ03014 270 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 SNX1Q13596 522 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 GTF2H3Q13889 308 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 KIR2DS5Q14953 304 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 CLPPQ16740 277 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-220ENST00000569916 AMZ1Q400G9 498 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF761Q86XN6 746 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-220ENST00000569916 TRAPPC5Q8IUR0 188 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 RASGEF1AQ8N9B8 481 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 GLIS1Q8NBF1 620 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF398Q8TD17 642 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 FGF11Q92914 225 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF578Q96N58 590 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-220ENST00000569916 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 ZCCHC2Q9C0B9 1178 aaKnown RBP12.84□□□□□ -0.35
CNOT1-220ENST00000569916 SEMA6CQ9H3T2 930 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 SARS2Q9NP81 518 aaKnown RBP12.84□□□□□ -0.35
CNOT1-220ENST00000569916 PRDM8Q9NQV8 689 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF148Q9UQR1 794 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 DNAJC16Q9Y2G8 782 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 LAMA5O15230 3695 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 OR5K4A6NMS3 321 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 ERI2A8K979 691 aaKnown RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 AGAP14A8MT82 685 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 TMX2-CTNND1H3BSU7 103 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 PSMD3O43242 534 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 ZW10O43264 779 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 IFNB1P01574 187 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 FGGP02679 453 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 ETS1P14921 441 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 FDFT1P37268 417 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 HADHAP40939 763 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 UBE2IP63279 158 aaKnown RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 TMPRSS15P98073 1019 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 EIF3IQ13347 325 aaKnown RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 NFATC2Q13469 925 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 SQSTM1Q13501 440 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 CCNG2Q16589 344 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 NKAIN2Q5VXU1 208 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 DRICH1Q6PGQ1 229 aaPredicted RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 FOXR1Q6PIV2 292 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 ZNF574Q6ZN55 896 aaPredicted RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 MICALCLQ6ZW33 695 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 RAB11FIP2Q7L804 512 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 PRUNE1Q86TP1 453 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 SLC9B2Q86UD5 537 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 PIM3Q86V86 326 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 DNAJC1Q96KC8 554 aaKnown RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 TTC25Q96NG3 672 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 SLC46A1Q96NT5 459 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 SLC38A3Q99624 504 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 STRADBQ9C0K7 418 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 KCNF1Q9H3M0 494 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 ASB8Q9H765 288 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 ETNK1Q9HBU6 452 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 THSD1Q9NS62 852 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 PIH1D1Q9NWS0 290 aaKnown RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 KCNK4Q9NYG8 393 aa12.83□□□□□ -0.36
CNOT1-220ENST00000569916 SCHIP1Q9P0W5 487 aaPredicted RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 DSPP15924 2871 aaKnown RBP12.83□□□□□ -0.36
CNOT1-220ENST00000569916 ITPR1Q14643 2758 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 OR2AG2A6NM03 316 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 CDRT15L2A8MXV6 281 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 H7C0S8 307 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 CCL22O00626 93 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 PLD2O14939 933 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 CEP104O60308 925 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 SUN1O94901 812 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 ITGA2BP08514 1039 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 HGFP14210 728 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 BRAFP15056 766 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 TPH1P17752 444 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 RBMS1P29558 406 aaKnown RBP12.82□□□□□ -0.36
CNOT1-220ENST00000569916 AKT1P31749 480 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 CXCR5P32302 372 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 MLLT3P42568 568 aaPredicted RBP12.82□□□□□ -0.36
CNOT1-220ENST00000569916 PCBP4P57723 403 aaKnown RBP12.82□□□□□ -0.36
CNOT1-220ENST00000569916 GPLD1P80108 840 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 CFHR1Q03591 330 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 SEMA5AQ13591 1074 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 POU6F1Q14863 301 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 SEPT7Q16181 437 aaKnown RBP12.82□□□□□ -0.36
CNOT1-220ENST00000569916 PHF19Q5T6S3 580 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 C19orf48Q6RUI8 117 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 USP53Q70EK8 1073 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 CLEC14AQ86T13 490 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 LINC00523Q86TU6 105 aa12.82□□□□□ -0.36
CNOT1-220ENST00000569916 REXO1L1PQ8IX06 675 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms