RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 TMEM135Q86UB9 458 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 LRRTM4Q86VH4 590 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CCDC25Q86WR0 208 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 GKN2Q86XP6 184 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CCNJLQ8IV13 435 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 ANKMY2Q8IV38 441 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 NAXDQ8IW45 347 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 PIANPQ8IYJ0 282 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 ZBED8Q8IZ13 594 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 FBXO36Q8NEA4 188 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 SEC14L1Q92503 715 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 SCARF2Q96GP6 870 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 SGSM3Q96HU1 749 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 RHOXF2Q9BQY4 288 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 GSDMCQ9BYG8 508 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 TMEM168Q9H0V1 697 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CAAP1Q9H8G2 361 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 TRNAU1APQ9NX07 287 aaKnown RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 MTRF1LQ9UGC7 380 aaKnown RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 ZC3H7BQ9UGR2 993 aaKnown RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 PRKAB1Q9Y478 270 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CSNK1G3Q9Y6M4 447 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 GVINP1Q7Z2Y8 2422 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 OR2AG2A6NM03 316 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 E7ESA3 106 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 PFDN6O15212 129 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 FUCA1P04066 466 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 ACP5P13686 325 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 CD59P13987 128 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 SDHBP21912 280 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 PMLP29590 882 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 TTPAP49638 278 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 LRP8Q14114 963 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 ITIH4Q14624 930 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 DBN1Q16643 649 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 LONRF1Q17RB8 773 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 PLA2G4EQ3MJ16 856 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 ZDHHC24Q6UX98 284 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 CERS6Q6ZMG9 384 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 KANSL1Q7Z3B3 1105 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 SDCCAG8Q86SQ7 713 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-217ENST00000569263 IFT20Q8IY31 132 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 SDR16C5Q8N3Y7 309 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 SLC25A45Q8N413 288 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 EID2Q8N6I1 236 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 RASGEF1AQ8N9B8 481 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-217ENST00000569263 RHBDD1Q8TEB9 315 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 SCG3Q8WXD2 468 aaKnown RBP12.89□□□□□ -0.35
CNOT1-217ENST00000569263 IFT81Q8WYA0 676 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 ZNF514Q96K75 400 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-217ENST00000569263 FCRL3Q96P31 734 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-217ENST00000569263 FAM129AQ9BZQ8 928 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 FOXP3Q9BZS1 431 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 PHACTR1Q9C0D0 580 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 CLPBQ9H078 707 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 C20orf96Q9NUD7 363 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-217ENST00000569263 TEX264Q9Y6I9 313 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 FAM169AQ9Y6X4 670 aa12.89□□□□□ -0.35
CNOT1-217ENST00000569263 ASCC3Q8N3C0 2202 aaKnown RBP12.89□□□□□ -0.35
CNOT1-217ENST00000569263 COL5A1P20908 1838 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-217ENST00000569263 IGLV3-16A0A075B6K0 115 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 ZCWPW2A0A1B0GU75 182 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 LMO7DNF2Z398 122 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 SLC30A4O14863 429 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CHUKO15111 745 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 KMOO15229 486 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 SH3BP5O60239 455 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CELA2BP08218 269 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-217ENST00000569263 ATP1B2P14415 290 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-217ENST00000569263 VCLP18206 1134 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 ARNTP27540 789 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 ACTR1BP42025 376 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 NSG1P42857 185 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CTSCP53634 463 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 ACTR1AP61163 376 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CTBSQ01459 385 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CUL1Q13616 776 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 SEMA3AQ14563 771 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 FASTKD3Q14CZ7 662 aaKnown RBP12.88□□□□□ -0.35
CNOT1-217ENST00000569263 RSPO4Q2I0M5 234 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-217ENST00000569263 DEFB133Q30KQ1 61 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 RNF187Q5TA31 235 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-217ENST00000569263 ZNF470Q6ECI4 717 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 NEPROQ6NW34 567 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 SLC30A9Q6PML9 568 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 TMEM220Q6QAJ8 160 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 KCNMB4Q86W47 210 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 IGDCC3Q8IVU1 814 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 OR4C6Q8NH72 309 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CCL4L1Q8NHW4 92 aa12.88□□□□□ -0.35
CNOT1-217ENST00000569263 CALML6Q8TD86 181 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms