RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PCDHB3Q9Y5E6 796 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 KLHL33A6NCF5 533 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 PSTPIP1O43586 416 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 UBXN7O94888 489 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 EPOP01588 193 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 HMGCLP35914 325 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 UBE2IP63279 158 aaKnown RBP18.34■□□□□ 0.53
LINC01238-205ENST00000567549 IL11RAQ14626 422 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 CRTC2Q53ET0 693 aaPredicted RBP18.34■□□□□ 0.53
LINC01238-205ENST00000567549 CRTC3Q6UUV7 619 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 GPR26Q8NDV2 337 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 P3H4Q92791 437 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 CXorf40BQ96DE9 158 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 ZDHHC12Q96GR4 267 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 PRDM8Q9NQV8 689 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 TMEM184BQ9Y519 407 aaPredicted RBP18.34■□□□□ 0.53
LINC01238-205ENST00000567549 ADGRG1Q9Y653 693 aa18.34■□□□□ 0.53
LINC01238-205ENST00000567549 MFAP3LO75121 409 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 STK17BO94768 372 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 ZIC2O95409 532 aaPredicted RBP18.33■□□□□ 0.52
LINC01238-205ENST00000567549 EML2O95834 649 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 DYNLT1P63172 113 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 ITGA9Q13797 1035 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 TCEAL1Q15170 157 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 AGAP9Q5VTM2 703 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 ABRAXAS1Q6UWZ7 409 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 ADGRG6Q86SQ4 1221 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 RNF25Q96BH1 459 aaPredicted RBP18.33■□□□□ 0.52
LINC01238-205ENST00000567549 LRRC45Q96CN5 670 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 C9orf72Q96LT7 481 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 TEKT5Q96M29 485 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 KLHL3Q9UH77 587 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 IL17BQ9UHF5 180 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 PKP3Q9Y446 797 aa18.33■□□□□ 0.52
LINC01238-205ENST00000567549 C3orf70A6NLC5 250 aaPredicted RBP18.32■□□□□ 0.52
LINC01238-205ENST00000567549 PMPCBO75439 489 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 ZNF189O75820 626 aaPredicted RBP18.32■□□□□ 0.52
LINC01238-205ENST00000567549 RASSF9O75901 435 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 C9P02748 559 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 MT-ND3P03897 115 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 BPIP17213 487 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 POLE2P56282 527 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 FOXM1Q08050 763 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 KCNAB2Q13303 367 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 LDLRAP1Q5SW96 308 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 CPNE8Q86YQ8 564 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 TRAPPC5Q8IUR0 188 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 VSTM4Q8IW00 320 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 RNF214Q8ND24 703 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 LRRN4Q8WUT4 740 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 HTR3CQ8WXA8 447 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 TADA1Q96BN2 335 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 RBM41Q96IZ5 413 aaKnown RBP18.32■□□□□ 0.52
LINC01238-205ENST00000567549 ZNF514Q96K75 400 aaPredicted RBP18.32■□□□□ 0.52
LINC01238-205ENST00000567549 FSD1LQ9BXM9 530 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 CEP41Q9BYV8 373 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 ULBP3Q9BZM4 244 aa18.32■□□□□ 0.52
LINC01238-205ENST00000567549 KLHL8Q9P2G9 620 aaPredicted RBP18.32■□□□□ 0.52
LINC01238-205ENST00000567549 DNMT3AQ9Y6K1 912 aaPredicted RBP18.32■□□□□ 0.52
LINC01238-205ENST00000567549 HACD1B0YJ81 288 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 SUV39H1O43463 412 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 PIRTP0C851 137 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 PYGMP11217 842 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 TNNT1P13805 278 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 ITGB6P18564 788 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 HLA-DPA1P20036 260 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 SPAM1P38567 509 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 ARSDP51689 593 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 CYP4F2P78329 520 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 PRKD1Q15139 912 aaPredicted RBP18.31■□□□□ 0.52
LINC01238-205ENST00000567549 TFDP3Q5H9I0 405 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 BEND7Q8N7W2 519 aaPredicted RBP18.31■□□□□ 0.52
LINC01238-205ENST00000567549 APOBEC4Q8WW27 367 aaKnown RBP18.31■□□□□ 0.52
LINC01238-205ENST00000567549 SEC14L1Q92503 715 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 CALR3Q96L12 384 aaKnown RBP18.31■□□□□ 0.52
LINC01238-205ENST00000567549 PPP1R2P1Q96PQ5 205 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 TBC1D10AQ9BXI6 508 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 ZNF768Q9H5H4 540 aaKnown RBP18.31■□□□□ 0.52
LINC01238-205ENST00000567549 SPTLC3Q9NUV7 552 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 ANAPC2Q9UJX6 822 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 TRHDEQ9UKU6 1024 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 DNAJC16Q9Y2G8 782 aa18.31■□□□□ 0.52
LINC01238-205ENST00000567549 FLNBO75369 2602 aaKnown RBP18.31■□□□□ 0.52
LINC01238-205ENST00000567549 AKR1B15C9JRZ8 316 aaPredicted RBP18.3■□□□□ 0.52
LINC01238-205ENST00000567549 CST8O60676 142 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 ZRANB2O95218 330 aaKnown RBP eCLIP18.3■□□□□ 0.52
LINC01238-205ENST00000567549 MT-CYBP00156 380 aaPredicted RBP18.3■□□□□ 0.52
LINC01238-205ENST00000567549 CCNYL3P0C7X3 344 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 WT1P19544 449 aaPredicted RBP18.3■□□□□ 0.52
LINC01238-205ENST00000567549 TCN2P20062 427 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 PTPN3P26045 913 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 CAPZBP47756 277 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 CDC20Q12834 499 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 TMEM115Q12893 351 aaPredicted RBP18.3■□□□□ 0.52
LINC01238-205ENST00000567549 MPP3Q13368 585 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 PPP2R5EQ16537 467 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 PLA2G4EQ3MJ16 856 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 NPNTQ6UXI9 565 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 GLT6D1Q7Z4J2 308 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 PRSS42Q7Z5A4 293 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms