RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 APOC2P02655 101 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 XRCC1P18887 633 aaPredicted RBP19.88■□□□□ 0.77
CLN6-207ENST00000566347 HLA-DPA1P20036 260 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 MAPK9P45984 424 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 COPS2P61201 443 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 UBE2IP63279 158 aaKnown RBP19.88■□□□□ 0.77
CLN6-207ENST00000566347 XRCC4Q13426 336 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 GTF2H3Q13889 308 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 PLA2G4EQ3MJ16 856 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 SNAP47Q5SQN1 464 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 PLXDC1Q8IUK5 500 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 BRSK1Q8TDC3 778 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 PMEPA1Q969W9 287 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 MRGPRX2Q96LB1 330 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 FERMT1Q9BQL6 677 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 SEMA4CQ9C0C4 833 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 OCIAD1Q9NX40 245 aa19.88■□□□□ 0.77
CLN6-207ENST00000566347 PDZK1P1A8MUH7 402 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 MTX2O75431 263 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 IPO7O95373 1038 aaKnown RBP19.87■□□□□ 0.77
CLN6-207ENST00000566347 VIPP01282 170 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 VCLP18206 1134 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 ARSDP51689 593 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 SLC1A5Q15758 541 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 ATP13A5Q4VNC0 1218 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 CCDC181Q5TID7 509 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 GLT6D1Q7Z4J2 308 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 TRIM48Q8IWZ4 208 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 TTC30BQ8N4P2 665 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 SLC25A41Q8N5S1 370 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 BMPERQ8N8U9 685 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 IPMKQ8NFU5 416 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 GDAP1Q8TB36 358 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 KRT35Q92764 455 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 NKD1Q969G9 470 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 OXNAD1Q96HP4 312 aaPredicted RBP19.87■□□□□ 0.77
CLN6-207ENST00000566347 PANX2Q96RD6 677 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 TBC1D10AQ9BXI6 508 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 FSD1LQ9BXM9 530 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 ZCCHC2Q9C0B9 1178 aaKnown RBP19.87■□□□□ 0.77
CLN6-207ENST00000566347 SLC23A2Q9UGH3 650 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 RSPH14Q9UHP6 348 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 TFR2Q9UP52 801 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 DNAJC16Q9Y2G8 782 aa19.87■□□□□ 0.77
CLN6-207ENST00000566347 PRR19A6NJB7 356 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 A8MU76 341 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 PPFIA2O75334 1257 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 PLA2G2AP14555 144 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 UGT1A3P35503 534 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 SPAM1P38567 509 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 MC2RQ01718 297 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 TMEM115Q12893 351 aaPredicted RBP19.86■□□□□ 0.77
CLN6-207ENST00000566347 NOMO1Q15155 1222 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 KHDC1Q4VXA5 237 aaKnown RBP19.86■□□□□ 0.77
CLN6-207ENST00000566347 AGAP9Q5VTM2 703 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 WASH2PQ6VEQ5 465 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 TMEM26Q6ZUK4 368 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 TRAPPC5Q8IUR0 188 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 TMTC1Q8IUR5 882 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 ZNF547Q8IVP9 402 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 IL22RA1Q8N6P7 574 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 BLOC1S5Q8TDH9 187 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 TTC25Q96NG3 672 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 ZPBPQ9BS86 351 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 HEMGNQ9BXL5 484 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 IL26Q9NPH9 171 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 WASH6PQ9NQA3 447 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 FBXO8Q9NRD0 319 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 POT1Q9NUX5 634 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 IL17CQ9P0M4 197 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 SCHIP1Q9P0W5 487 aaPredicted RBP19.86■□□□□ 0.77
CLN6-207ENST00000566347 TMPRSS11EQ9UL52 423 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 EFR3BQ9Y2G0 817 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 PKP3Q9Y446 797 aa19.86■□□□□ 0.77
CLN6-207ENST00000566347 EPN1Q9Y6I3 576 aaPredicted RBP19.86■□□□□ 0.77
CLN6-207ENST00000566347 MN1Q10571 1320 aaPredicted RBP19.85■□□□□ 0.77
CLN6-207ENST00000566347 F5H423 210 aaPredicted RBP19.85■□□□□ 0.77
CLN6-207ENST00000566347 H7C0C1 242 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 KCNJ13O60928 360 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 NDUFA10O95299 355 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 IDSP22304 550 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 CTNNA1P35221 906 aaKnown RBP19.85■□□□□ 0.77
CLN6-207ENST00000566347 SLC19A1P41440 591 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 CHRNA4P43681 627 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 ATP5OP48047 213 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 ITGA9Q13797 1035 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 SEPT7Q16181 437 aaKnown RBP19.85■□□□□ 0.77
CLN6-207ENST00000566347 LDLRAP1Q5SW96 308 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 ANKS6Q68DC2 871 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 ITPRIPL1Q6GPH6 555 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 ABRAXAS1Q6UWZ7 409 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 CEACAM20Q6UY09 585 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 RBM12BQ8IXT5 1001 aaKnown RBP19.85■□□□□ 0.77
CLN6-207ENST00000566347 JPH3Q8WXH2 748 aaPredicted RBP19.85■□□□□ 0.77
CLN6-207ENST00000566347 MRFAP1L1Q96HT8 127 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 ARHGAP9Q9BRR9 750 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 GBA3Q9H227 469 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 ZNF624Q9P2J8 865 aaPredicted RBP19.85■□□□□ 0.77
CLN6-207ENST00000566347 PCDHA3Q9Y5H8 950 aa19.85■□□□□ 0.77
CLN6-207ENST00000566347 GLYATL1P3A0A0U1RQE8 302 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms