RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 WSCD2Q2TBF2 565 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 N4BP2L1Q5TBK1 243 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 HHATQ5VTY9 493 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 UGT3A1Q6NUS8 523 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 LVRNQ6Q4G3 990 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 OR2T34Q8NGX1 318 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 NAT14Q8WUY8 206 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 KCTD4Q8WVF5 259 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 KLK6Q92876 244 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 NECAB3Q96P71 396 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 C1QTNF1Q9BXJ1 281 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 SLC17A9Q9BYT1 436 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 TRMT6Q9UJA5 497 aaKnown RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 CNOT6Q9ULM6 557 aaKnown RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 OAS3Q9Y6K5 1087 aaKnown RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 IQCF5A8MTL0 148 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 MTX2O75431 263 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 KLHL2O95198 593 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 WISP3O95389 354 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 PAK4O96013 591 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 IGLV3-19P01714 112 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 PCCBP05166 539 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 SKIV2L2P42285 1042 aaKnown RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 WDR4P57081 412 aaKnown RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 PPP2CBP62714 309 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 PPP2CAP67775 309 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 KHDC1Q4VXA5 237 aaKnown RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 TMEM31Q5JXX7 168 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 PNCKQ6P2M8 343 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 ADAMTSL4Q6UY14 1074 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 KYAT3Q6YP21 454 aaKnown RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 CENPLQ8N0S6 344 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 PLA2G15Q8NCC3 412 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 DYDC1Q8WWB3 177 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 PAIP2Q9BPZ3 127 aaKnown RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 CAPS2Q9BXY5 557 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 SARS2Q9NP81 518 aaKnown RBP18.53■□□□□ 0.56
COMMD4-213ENST00000565834 ZNF358Q9NW07 568 aa18.53■□□□□ 0.56
COMMD4-213ENST00000565834 APBB3O95704 486 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 LTA4HP09960 611 aaKnown RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 OR56A5P0C7T3 313 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 CCDC166P0CW27 439 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 ZNF37AP17032 561 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 MAT2AP31153 395 aaKnown RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 SLC26A3P40879 764 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 CSHL1Q14406 222 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 IRF4Q15306 451 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 TSNAXIP1Q2TAA8 658 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 TTC19Q6DKK2 380 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 C16orf46Q6P387 395 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 TMEM207Q6UWW9 146 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 DET1Q7L5Y6 550 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 TAX1BP1Q86VP1 789 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 TRIM69Q86WT6 500 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 SIDT2Q8NBJ9 832 aaKnown RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 TP53I13Q8NBR0 393 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 UBXN10Q96LJ8 280 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 ZCCHC2Q9C0B9 1178 aaKnown RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 SYTL2Q9HCH5 934 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 TMEM216Q9P0N5 145 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 CYP8B1Q9UNU6 501 aa18.52■□□□□ 0.56
COMMD4-213ENST00000565834 RUVBL2Q9Y230 463 aaKnown RBP18.52■□□□□ 0.56
COMMD4-213ENST00000565834 F8W8V4 182 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 AP2A2O94973 939 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 TRIM16O95361 564 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 ASMTLO95671 621 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 SEMA4FO95754 770 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 DCNP07585 359 aaKnown RBP18.51■□□□□ 0.55
COMMD4-213ENST00000565834 ITGB6P18564 788 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 ETV4P43268 484 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 KPNA2P52292 529 aaKnown RBP18.51■□□□□ 0.55
COMMD4-213ENST00000565834 SIGLEC14Q08ET2 396 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 DLG1Q12959 904 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 MTAPQ13126 283 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 FAM83EQ2M2I3 478 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 CCDC153Q494R4 210 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 ZNF648Q5T619 568 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-213ENST00000565834 AGAP9Q5VTM2 703 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 PAQR3Q6TCH7 311 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 ARMC2Q8NEN0 867 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 CD200R1Q8TD46 325 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 ANKRD49Q8WVL7 239 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 ASB12Q8WXK4 309 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 CENPTQ96BT3 561 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 NXNL1Q96CM4 212 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 HIC2Q96JB3 615 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 PANX3Q96QZ0 392 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 GALPQ9UBC7 116 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 EMCNQ9ULC0 261 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 NCOR1O75376 2440 aa18.51■□□□□ 0.55
COMMD4-213ENST00000565834 QSOX1O00391 747 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 PLIN3O60664 434 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 ZNF217O75362 1048 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 TEAD1P28347 426 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 OXTRP30559 389 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 CLCN7P51798 805 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 IL9RQ01113 521 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 TMEM115Q12893 351 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-213ENST00000565834 KLC3Q6P597 504 aa18.5■□□□□ 0.55
COMMD4-213ENST00000565834 TRIM74Q86UV6 250 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms