RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 LAMP2P13473 410 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CD1EP15812 388 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 EPB42P16452 691 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 PSMA3P25788 255 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 GDI1P31150 447 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 GJA4P35212 333 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 OPRD1P41143 372 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 ARFIP2P53365 341 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SULT2A1Q06520 285 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 NFATC2Q13469 925 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ADGRE1Q14246 886 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 DBN1Q16643 649 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 FAM83EQ2M2I3 478 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ATP13A5Q4VNC0 1218 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ARL13AQ5H913 290 aaPredicted RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 RALGPS1Q5JS13 557 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ZYG11AQ6WRX3 759 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 TMEM184AQ6ZMB5 413 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 Q6ZVL8 140 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 HSD11B1LQ7Z5J1 315 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 NLRP8Q86W28 1048 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 LSMEM2Q8N112 164 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 STK40Q8N2I9 435 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.17□□□□□ -1.428e-7■■■■■ 29.2
CHD9-217ENST00000565832 MAPK15Q8TD08 544 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ESAMQ96AP7 390 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ERP27Q96DN0 273 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 C7orf26Q96N11 449 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 LRRC37BQ96QE4 947 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 HEPHQ9BQS7 1158 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SLC2A11Q9BYW1 496 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 LMAN2LQ9H0V9 348 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 PCDH12Q9NPG4 1184 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ATP13A2Q9NQ11 1180 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CACNA2D2Q9NY47 1150 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ZDHHC2Q9UIJ5 367 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 TMPRSS11EQ9UL52 423 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 RIMKLBQ9ULI2 386 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ANKRD6Q9Y2G4 727 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SLC30A1Q9Y6M5 507 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SCN8AQ9UQD0 1980 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 A0A087X1B8 175 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 GLYATL1P3A0A0U1RQE8 302 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 NCF1BA6NI72 391 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 C16orf96A6NNT2 1141 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 NCF1CA8MVU1 366 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 H3BQ06 376 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 H7C0S8 307 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 UBXN8O00124 270 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 KPNA3O00505 521 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 ZNF195O14628 629 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 KIAA0754O94854 1291 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 SIX3O95343 332 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 PAPLNO95428 1278 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CBX6O95503 412 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 THBS1P07996 1170 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 C1SP09871 688 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 T-ENOLP0DO92 83 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TROVE2P10155 538 aaKnown RBP eCLIP6.16□□□□□ -1.42
CHD9-217ENST00000565832 COL6A2P12110 1019 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 NCF1P14598 390 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 CD1DP15813 335 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 ZNF37AP17032 561 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 OGNP20774 298 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 NNMTP40261 264 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 ETV3P41162 512 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 POLD2P49005 469 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CDH13P55290 713 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CACNG1Q06432 222 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 FCHO2Q0JRZ9 810 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 RUNX3Q13761 415 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 ZNF234Q14588 700 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 FNDC3BQ53EP0 1204 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TECRLQ5HYJ1 363 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 C9orf64Q5T6V5 341 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 FAM45BPQ6NSW5 357 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 RIPOR1Q6ZS17 1223 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TPRG1Q6ZUI0 275 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 DET1Q7L5Y6 550 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 GALNT7Q86SF2 657 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CRLF3Q8IUI8 442 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 PELI3Q8N2H9 469 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 KIF2BQ8N4N8 673 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 PIWIL2Q8TC59 973 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 FAM45AQ8TCE6 357 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 ZNF398Q8TD17 642 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 LKAAEAR1Q8TD35 194 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 PPP4R1Q8TF05 950 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 ZNF641Q96N77 438 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TSNARE1Q96NA8 513 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TUBGCP5Q96RT8 1024 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CDCA3Q99618 268 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 MRPL57Q9BQC6 102 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 WRAP53Q9BUR4 548 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 OSBPL1AQ9BXW6 950 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CEP44Q9C0F1 390 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 MRPL46Q9H2W6 279 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TTYH1Q9H313 450 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 INTS10Q9NVR2 710 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms