RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CD1CP29017 333 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 OR1D5P58170 312 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 DMPKQ09013 629 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 LAMB3Q13751 1172 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 LONRF2Q1L5Z9 754 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 ARHGEF18Q6ZSZ5 1173 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 NYAP1Q6ZVC0 841 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 TRAPPC5Q8IUR0 188 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 TMEM139Q8IV31 216 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 TTC30BQ8N4P2 665 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 OXNAD1Q96HP4 312 aaPredicted RBP16.51■□□□□ 0.23
USB1-211ENST00000565662 ALS2CR12Q96Q35 445 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 DDA1Q9BW61 102 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 KLC4Q9NSK0 619 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 PDP2Q9P2J9 529 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 CPNE7Q9UBL6 633 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 TBC1D29Q9UFV1 150 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 PISDQ9UG56 409 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 PCDHGA3Q9Y5H0 932 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 B4E171 279 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 CFAP99D6REC4 459 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 PPM1DO15297 605 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 TOX3O15405 576 aaPredicted RBP16.5■□□□□ 0.23
USB1-211ENST00000565662 B4GAT1O43505 415 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 VIPP01282 170 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 ITPKBP27987 946 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 SLC5A2P31639 672 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 TSPAN7P41732 249 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 ATP1A2P50993 1020 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 CXADRP78310 365 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 VAC14Q08AM6 782 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 TMEM115Q12893 351 aaPredicted RBP16.5■□□□□ 0.23
USB1-211ENST00000565662 ATP13A5Q4VNC0 1218 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 KLHL35Q6PF15 583 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 XKR5Q6UX68 686 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 RANBP10Q6VN20 620 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 SLC25A41Q8N5S1 370 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 ZSCAN1Q8NBB4 408 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 TAAR9Q96RI9 348 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 CCNL2Q96S94 520 aaPredicted RBP16.5■□□□□ 0.23
USB1-211ENST00000565662 LRRC40Q9H9A6 602 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 VPS37BQ9H9H4 285 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 ARNT2Q9HBZ2 717 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 IL26Q9NPH9 171 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 KCNK6Q9Y257 313 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 SPO11Q9Y5K1 396 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 ST14Q9Y5Y6 855 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 DUSP10Q9Y6W6 482 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 PTPRQQ9UMZ3 2332 aa16.5■□□□□ 0.23
USB1-211ENST00000565662 IGHV5-10-1A0A0J9YXX1 117 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 PDZK1P1A8MUH7 402 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 STMND1H3BQB6 276 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 GAS8O95995 478 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 GSTM1P09488 218 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 STIP1P31948 543 aaKnown RBP16.49■□□□□ 0.23
USB1-211ENST00000565662 GSTM4Q03013 218 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 LLGL1Q15334 1064 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 PARP6Q2NL67 630 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 ABRAXAS1Q6UWZ7 409 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 CCDC81Q6ZN84 652 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 LINC00523Q86TU6 105 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 AMZ2Q86W34 360 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 GAS2L3Q86XJ1 694 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 KLHDC8BQ8IXV7 354 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 PTCD2Q8WV60 388 aaKnown RBP16.49■□□□□ 0.23
USB1-211ENST00000565662 PATE1Q8WXA2 126 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 ALG3Q92685 438 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 HES6Q96HZ4 224 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 CCDC74BQ96LY2 380 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 NUDT22Q9BRQ3 303 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 FICDQ9BVA6 458 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 RDH14Q9HBH5 336 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 TFR2Q9UP52 801 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 KIF26BQ2KJY2 2108 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 CACNA1GO43497 2377 aa16.49■□□□□ 0.23
USB1-211ENST00000565662 A0A1W2PNU3 283 aaPredicted RBP16.48■□□□□ 0.23
USB1-211ENST00000565662 F8W8V4 182 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 QSOX1O00391 747 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 ATXN7O15265 892 aaPredicted RBP16.48■□□□□ 0.23
USB1-211ENST00000565662 SNX2O60749 519 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 PRAMEF1O95521 474 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 ANKRD34CP0C6C1 535 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 MSH3P20585 1137 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 ITGALP20701 1170 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 PSMB4P28070 264 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 ADRA1AP35348 466 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 UBE2IP63279 158 aaKnown RBP16.48■□□□□ 0.23
USB1-211ENST00000565662 KLF1Q13351 362 aaPredicted RBP16.48■□□□□ 0.23
USB1-211ENST00000565662 ZNF662Q6ZS27 426 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 ZFPM2Q8WW38 1151 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 MAIP1Q8WWC4 291 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 CXorf40BQ96DE9 158 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 TBL1YQ9BQ87 522 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 EFHD1Q9BUP0 239 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 SEMA6CQ9H3T2 930 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 ITPR1Q14643 2758 aa16.48■□□□□ 0.23
USB1-211ENST00000565662 MN1Q10571 1320 aaPredicted RBP16.47■□□□□ 0.23
USB1-211ENST00000565662 K7ENP7 123 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 AKT1P31749 480 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 MAPK10P53779 464 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms