RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 TMEM121Q9BTD3 319 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 MAK16Q9BXY0 300 aaKnown RBP6.17□□□□□ -1.42
UBFD1-204ENST00000565634 BRD8Q9H0E9 1235 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 NEUROG2Q9H2A3 272 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 SYNDIG1Q9H7V2 258 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 PDFQ9HBH1 243 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 GDF3Q9NR23 364 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 LHX3Q9UBR4 397 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 ITGB1BP2Q9UKP3 347 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 SLC27A6Q9Y2P4 619 aa6.17□□□□□ -1.42
UBFD1-204ENST00000565634 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
UBFD1-204ENST00000565634 H7C0C1 242 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 TMPRSS2O15393 492 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 FGF10O15520 208 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 LIASO43766 372 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF500O60304 480 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 RAMP2O60895 175 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 URI1O94763 535 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 HTR3BO95264 441 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CLDN1O95832 211 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 PRKCGP05129 697 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CTSLP07711 333 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 MMP2P08253 660 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 PRLRP16471 622 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 PTPN7P35236 360 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CASRP41180 1078 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 GARSP41250 739 aaKnown RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ATP5OP48047 213 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ARRB1P49407 418 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 DUSP3P51452 185 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 NDST2P52849 883 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 NXPH1P58417 271 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 EIF3EP60228 445 aaKnown RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ECT2LQ008S8 904 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 AP1B1Q10567 949 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CDK5R2Q13319 367 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ILKQ13418 452 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CDH18Q13634 790 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 LRRC14Q15048 493 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 NOMO1Q15155 1222 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 TRIP13Q15645 432 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 OASLQ15646 514 aaKnown RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CDKN3Q16667 212 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 LONRF2Q1L5Z9 754 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 C9orf64Q5T6V5 341 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 FOXB2Q5VYV0 432 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ZFAND4Q86XD8 727 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 THNSL2Q86YJ6 484 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 PLD6Q8N2A8 252 aaKnown RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 TXLNBQ8N3L3 684 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 FAM71DQ8N9W8 422 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CCNYQ8ND76 341 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 SPATA22Q8NHS9 363 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 SLC35B2Q8TB61 432 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 PDCD6IPQ8WUM4 868 aaKnown RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 KLK6Q92876 244 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 PTPRN2Q92932 1015 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 RBM41Q96IZ5 413 aaKnown RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 EXOC2Q96KP1 924 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 APOLD1Q96LR9 279 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ALS2CR12Q96Q35 445 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 SLC2A11Q9BYW1 496 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 MAGEH1Q9H213 219 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CARD9Q9H257 536 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 TMEM245Q9H330 911 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CATSPERBQ9H7T0 1116 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ATP13A1Q9HD20 1204 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 PRSS16Q9NQE7 514 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 GEMIN8Q9NWZ8 242 aaKnown RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CRIM1Q9NZV1 1036 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 SEPT10Q9P0V9 454 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 RCOR3Q9P2K3 495 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-204ENST00000565634 LCMT1Q9UIC8 334 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 VPS28Q9UK41 221 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 SARDHQ9UL12 918 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 NEU2Q9Y3R4 380 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 SAR1BQ9Y6B6 198 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 CSMD1Q96PZ7 3565 aa6.16□□□□□ -1.42
UBFD1-204ENST00000565634 ADGRG4Q8IZF6 3080 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 SPENQ96T58 3664 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ARHGEF17Q96PE2 2063 aaPredicted RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 LY6G6EA0A0G2JKS1 128 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 TCRBV7S3A2A0A539 114 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 GOLGA6L9A6NEM1 432 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ARHGAP42A6NI28 874 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF487B1APH4 448 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 K7EM74 188 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 APOC4-APOC2K7ER74 178 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 MATN3O15232 486 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 METTL18O95568 372 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 APOC2P02655 101 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 DNTTP04053 509 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 HLA-DQB2P05538 268 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 DLDP09622 509 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 GIMD1P0DJR0 217 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 RBP3P10745 1247 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 PRF1P14222 555 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 POLR2EP19388 210 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 DGKAP23743 735 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 PTPN3P26045 913 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms