RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 WNT9AO14904 365 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 AREL1O15033 823 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 TRIM16O95361 564 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 MTHFD2P13995 350 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 SERPINB3P29508 390 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 SOX9P48436 509 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 RGS4P49798 205 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 LIG3P49916 1009 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 METAP1P53582 386 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 GALNT1Q10472 559 aaPredicted RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 BNIP1Q12981 228 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 TSNQ15631 228 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 SPRED3Q2MJR0 410 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 ERN2Q76MJ5 926 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 MMAAQ8IVH4 418 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 CHPFQ8IZ52 775 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 LSMEM2Q8N112 164 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 FUBP1Q96AE4 644 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 MOCOSQ96EN8 888 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 HDAC8Q9BY41 377 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 EML4Q9HC35 981 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 LATS2Q9NRM7 1088 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 SPATS2LQ9NUQ6 558 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 ZFP69BQ9UJL9 534 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 TMCO1Q9UM00 188 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 A0A1W2PPC1 479 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 CDC7O00311 574 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 ZNF195O14628 629 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 MAGEC1O60732 1142 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 OR56A5P0C7T3 313 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 DGKAP23743 735 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 SCTRP47872 440 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 HERVK_113P63132 956 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 ACOX1Q15067 660 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 TTLL9Q3SXZ7 439 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 ZNF678Q5SXM1 525 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 CYP2U1Q7Z449 544 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 EXT2Q93063 718 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 RAB7BQ96AH8 199 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 DCUN1D1Q96GG9 259 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 RILPQ96NA2 401 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 RIOK2Q9BVS4 552 aaKnown RBP19.33■□□□□ 0.68
CLN6-205ENST00000564846 ERVK-6Q9BXR3 956 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 ACSS2Q9NR19 701 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 IKZF3Q9UKT9 509 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 TMPRSS11EQ9UL52 423 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 ITM2BQ9Y287 266 aa19.33■□□□□ 0.68
CLN6-205ENST00000564846 NPEPPSL1A6NEC2 478 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 CFAP99D6REC4 459 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 UBXN8O00124 270 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 SPINT1O43278 529 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 GFAPP14136 432 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 MPSTP25325 297 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 B4GALNT1Q00973 533 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 FRMD7Q6ZUT3 714 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 CLNKQ7Z7G1 428 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 KIRREL3Q8IZU9 778 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 ZBTB2Q8N680 514 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 ZNF513Q8N8E2 541 aaPredicted RBP19.32■□□□□ 0.68
CLN6-205ENST00000564846 PTGR2Q8N8N7 351 aaPredicted RBP19.32■□□□□ 0.68
CLN6-205ENST00000564846 LKAAEAR1Q8TD35 194 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 COQ10AQ96MF6 247 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 VPS35Q96QK1 796 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 WRAP53Q9BUR4 548 aaKnown RBP19.32■□□□□ 0.68
CLN6-205ENST00000564846 ABCG8Q9H221 673 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 ZDHHC4Q9NPG8 344 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 VTI1BQ9UEU0 232 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 APOBEC2Q9Y235 224 aaKnown RBP19.32■□□□□ 0.68
CLN6-205ENST00000564846 ANTXRLA6NF34 631 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 SUPT3HB4E1H0 165 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 MATN2O00339 956 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 CCDC22O60826 627 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 SUPT3HO75486 399 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 ATP1B2P14415 290 aaPredicted RBP19.32■□□□□ 0.68
CLN6-205ENST00000564846 AKT1P31749 480 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 PSMD8P48556 350 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 PFKFB4Q16877 469 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 AAK1Q2M2I8 961 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 MAVSQ7Z434 540 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 MICALL1Q8N3F8 863 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 FBXO39Q8N4B4 442 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 DDHD1Q8NEL9 900 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 AP2M1Q96CW1 435 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 DTD2Q96FN9 168 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 EBF4Q9BQW3 602 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 COG4Q9H9E3 785 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 TRPV5Q9NQA5 729 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 ZDHHC2Q9UIJ5 367 aa19.32■□□□□ 0.68
CLN6-205ENST00000564846 C5orf42Q9H799 3197 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 TCF20Q9UGU0 1960 aaKnown RBP19.31■□□□□ 0.68
CLN6-205ENST00000564846 K7EQS6 105 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 HDAC3O15379 428 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 KLK8O60259 260 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 SUPT7LO94864 414 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 GM2AP17900 193 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 ITGB6P18564 788 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 KIR2DL1P43626 348 aaPredicted RBP19.31■□□□□ 0.68
CLN6-205ENST00000564846 CCR10P46092 362 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 IDH3AP50213 366 aa19.31■□□□□ 0.68
CLN6-205ENST00000564846 NAA20P61599 178 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms