RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 SIPA1Q96FS4 1042 aa11.13□□□□□ -0.63
SNX29-204ENST00000564791 VPS35Q96QK1 796 aa11.13□□□□□ -0.63
SNX29-204ENST00000564791 CCT8L2Q96SF2 557 aa11.13□□□□□ -0.63
SNX29-204ENST00000564791 MRPL57Q9BQC6 102 aaKnown RBP11.13□□□□□ -0.63
SNX29-204ENST00000564791 MRPL46Q9H2W6 279 aaKnown RBP11.13□□□□□ -0.63
SNX29-204ENST00000564791 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
SNX29-204ENST00000564791 SYTL2Q9HCH5 934 aa11.13□□□□□ -0.63
SNX29-204ENST00000564791 SARS2Q9NP81 518 aaKnown RBP11.13□□□□□ -0.63
SNX29-204ENST00000564791 MID2Q9UJV3 735 aa11.13□□□□□ -0.63
SNX29-204ENST00000564791 SORCS3Q9UPU3 1222 aa11.13□□□□□ -0.63
SNX29-204ENST00000564791 TCRBV21S2A2A0A5A6 115 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 IGLON5A6NGN9 336 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 TARM1B6A8C7 271 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 K7ESM1 405 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 INPP4BO15327 924 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 ZBTB14O43829 449 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 SLC25A14O95258 325 aaPredicted RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 TRIM16O95361 564 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 MYL2P10916 166 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 CHRNB1P11230 501 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 FGF3P11487 239 aaPredicted RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 NDUFV2P19404 249 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 TFEBP19484 476 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 PRKCQQ04759 706 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 CCDC15Q0P6D6 951 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 TTC31Q49AM3 519 aaPredicted RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 SEL1L3Q68CR1 1132 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 RAET1GQ6H3X3 334 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 UGT3A1Q6NUS8 523 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 KIAA1324Q6UXG2 1013 aaKnown RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 ZYG11AQ6WRX3 759 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 ZCCHC23Q6ZST2 131 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 DET1Q7L5Y6 550 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 TRIM42Q8IWZ5 723 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 CPNE9Q8IYJ1 553 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 RDH11Q8TC12 318 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 ZNF473Q8WTR7 871 aaKnown RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 DCUN1D1Q96GG9 259 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 ALG9Q9H6U8 611 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 SLCO1B3Q9NPD5 702 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 MBD1Q9UIS9 605 aaPredicted RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 CNOT6Q9ULM6 557 aaKnown RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 ZFR2Q9UPR6 939 aaKnown RBP11.12□□□□□ -0.63
SNX29-204ENST00000564791 DHRS7Q9Y394 339 aa11.12□□□□□ -0.63
SNX29-204ENST00000564791 ANKRD12Q6UB98 2062 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 KRBA1A5PL33 1030 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 CFAP99D6REC4 459 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 NDUFAB1O14561 156 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 KLF11O14901 512 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 PLRG1O43660 514 aaKnown RBP11.11□□□□□ -0.63
SNX29-204ENST00000564791 TM7SF2O76062 418 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 TSPAN12O95859 305 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 C7P10643 843 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 ATP1B2P14415 290 aaPredicted RBP11.11□□□□□ -0.63
SNX29-204ENST00000564791 MSH3P20585 1137 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 TARSP26639 723 aaKnown RBP11.11□□□□□ -0.63
SNX29-204ENST00000564791 SKIV2L2P42285 1042 aaKnown RBP11.11□□□□□ -0.63
SNX29-204ENST00000564791 GPR1P46091 355 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 ADPRHP54922 357 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 ZBTB16Q05516 673 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 DPTQ07507 201 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 ACAP2Q15057 778 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 LDLRAP1Q5SW96 308 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 CPLX4Q7Z7G2 160 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 PHYKPLQ8IUZ5 450 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 NKAPQ8N5F7 415 aaKnown RBP11.11□□□□□ -0.63
SNX29-204ENST00000564791 OR14C36Q8NHC7 312 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 PPP1R14CQ8TAE6 165 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 RAB3IL1Q8TBN0 382 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 INPP5DQ92835 1189 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 PTERQ96BW5 349 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 SGF29Q96ES7 293 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 LINGO1Q96FE5 620 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 MRGPRX1Q96LB2 322 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 DERL2Q9GZP9 239 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 NSRP1Q9H0G5 558 aaKnown RBP11.11□□□□□ -0.63
SNX29-204ENST00000564791 FBXL21Q9UKT6 434 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 IKZF3Q9UKT9 509 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 SCML1Q9UN30 329 aa11.11□□□□□ -0.63
SNX29-204ENST00000564791 PRR23AA6NEV1 266 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 SGTAO43765 313 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 DLX3O60479 287 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 EDF1O60869 148 aaKnown RBP11.1□□□□□ -0.63
SNX29-204ENST00000564791 PCCBP05166 539 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 RBP1P09455 135 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 OR56A5P0C7T3 313 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 RALBP11234 206 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 GABRG2P18507 467 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 IL2P60568 153 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 BST1Q10588 318 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 OR4D1Q15615 310 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 CRY1Q16526 586 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 ATG16L1Q676U5 607 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 CGB2Q6NT52 195 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 NAPRTQ6XQN6 538 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 ISCA2Q86U28 154 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 TRIM74Q86UV6 250 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
SNX29-204ENST00000564791 ZBTB2Q8N680 514 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms